PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT45038.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

NAC

Protein Properties

Length: 347aa MW: 40161 Da PI: 6.6308

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT45038.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	170.6	4.9e-53	7	136	1	129
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvkaeek.ewyfFskrdkkyatgkrknratksgyWkatgkdkevlskk 96 +ppGfrFhPtdeelv++yL+kk+++++++l +vik++d+yk+ePwdL++ ++ aee+ +wyfFs++dkky+tg+r+nrat++g+Wkatg+dk+++s k PHT45038.1 7 VPPGFRFHPTDEELVDYYLRKKITSRRIDL-DVIKDIDLYKIEPWDLQElcRMGAEEQsDWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKAIYS-K 103 69**************************.9***********954555554445**********************************.8 PP NAM 97 gelvglkktLvfykgrapkgektdWvmheyrle 129 + l+g++ktLv+ykgrap+g+k+d +mheyrle PHT45038.1 104 HDLIGMRKTLVYYKGRAPNGQKSDFIMHEYRLE 136 899**************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 347 aa Download sequence
MNSLSHVPPG FRFHPTDEEL VDYYLRKKIT SRRIDLDVIK DIDLYKIEPW DLQELCRMGA 60 EEQSDWYFFS HKDKKYPTGT RTNRATAAGF WKATGRDKAI YSKHDLIGMR KTLVYYKGRA 120 PNGQKSDFIM HEYRLETDPN GAPQEEGWVI CRVFKKKIAA GMRMDTSEHG SPIWYDDQLS 180 FMQDMDSPKL IHPQINYNHY PNNYPNFKKE LDNLHYQIPP HNPHHQFLQQ LPLLETNSKL 240 VAKPPGCSSM PIFGNLNVNR PALLTQEHVH PTFANNDNQV ADQVTDWRVL DKFVASQLSQ 300 EDENNNYSPN APNTFQVTGD DVNLNKQEMA PENTSTASSS SQIDLWK

Sequence ? help Back to Top

Protein Sequence Length: 347 aa Download sequence

MNSLSHVPPG FRFHPTDEEL VDYYLRKKIT SRRIDLDVIK DIDLYKIEPW DLQELCRMGA  60
EEQSDWYFFS HKDKKYPTGT RTNRATAAGF WKATGRDKAI YSKHDLIGMR KTLVYYKGRA  120
PNGQKSDFIM HEYRLETDPN GAPQEEGWVI CRVFKKKIAA GMRMDTSEHG SPIWYDDQLS  180
FMQDMDSPKL IHPQINYNHY PNNYPNFKKE LDNLHYQIPP HNPHHQFLQQ LPLLETNSKL  240
VAKPPGCSSM PIFGNLNVNR PALLTQEHVH PTFANNDNQV ADQVTDWRVL DKFVASQLSQ  300
EDENNNYSPN APNTFQVTGD DVNLNKQEMA PENTSTASSS SQIDLWK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G12260.1	1e-118	NAC family protein