PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | PHT44477.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
|
||||||||
Family | WRKY | ||||||||
Protein Properties | Length: 344aa MW: 38640.6 Da PI: 9.9209 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 101.8 | 4.1e-32 | 277 | 335 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 +D+y+WrKYGqK++kgs++pr+YY+C+s gCp++k+ver+ edp+++++tYegeHnh+ PHT44477.1 277 SDEYSWRKYGQKPIKGSPHPRGYYKCSSMrGCPARKHVERCLEDPSMLIVTYEGEHNHP 335 69************************9988****************************8 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 344 aa Download sequence |
MEEIEEANNA AVENCHRVMS LLSSGTHDRN QYMNLVRETG EAVNKFKKVV TLLNSTLGHA 60 RVRKSNKFKT PLPHNILVEN PNCKIDDQAK DLRSRPIDEN RVLEMGGTNV KCNLTLGSPS 120 LELSSNSRNP LNFGQQTHLP SYNYLQQQQQ QQRLFLLQQQ QLKQPAEMMY RRSSSGVSLN 180 FDSSTCTPTM SSTRSFISSL SVDGSVANGS NFHLVGASQS LDQSSFQHKR RCSERGDEGS 240 VKCGSSGKCH CSKKRKHRVK RSIKVPAVSN KLADIPSDEY SWRKYGQKPI KGSPHPRGYY 300 KCSSMRGCPA RKHVERCLED PSMLIVTYEG EHNHPRMPSQ SANT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT2G30590.1 | 1e-109 | WRKY family protein |