PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | PHT44443.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
|
||||||||
Family | NAC | ||||||||
Protein Properties | Length: 215aa MW: 24415.6 Da PI: 6.3959 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 68.9 | 1.4e-21 | 4 | 62 | 71 | 128 |
NAM 71 gkrknratksgyWkatgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128 +k +rat sgyWkatgkd++v++ +gel+g++ktLvfyk+rap+g kt W+mhe+r+ PHT44443.1 4 KKADKRATISGYWKATGKDRTVFDPqTGELIGMRKTLVFYKNRAPHGIKTGWIMHEFRI 62 567899*****************9878899***************************97 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 215 aa Download sequence |
MSAKKADKRA TISGYWKATG KDRTVFDPQT GELIGMRKTL VFYKNRAPHG IKTGWIMHEF 60 RIENPHIPPK EDWVLCRVFH KGTKDENINS TNKLSPKNMY EACVTSINIM DNHEATMPKL 120 LPYGEAGYSP STALSFSNNS IHQSQNSSNL QLSQEINYKA LANEMIHSKC GKEDEFGFLF 180 DMNYFEESNL QDGGVINSCL EGDMKFEDEN SLVFI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT4G28530.1 | 5e-42 | NAC family protein |