PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT44431.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

G2-like

Protein Properties

Length: 434aa MW: 47705.9 Da PI: 4.9651

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT44431.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	108.3	4.1e-34	235	289	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+r+rWtpeLHe+Fveav++LGGse+AtPk +l+lmkv+gLt++hvkSHLQkYR+ PHT44431.1 235 KQRMRWTPELHEAFVEAVNKLGGSERATPKGVLKLMKVEGLTIYHVKSHLQKYRT 289 79****************************************************8 PP
2	Myb_DNA-binding	56.4	6.8e-18	237	288	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT+e++e +v+av++lGg t+k + + m +g+t +++ks++qky+ PHT44431.1 237 RMRWTPELHEAFVEAVNKLGGSeraTPKGVLKLMKvEGLTIYHVKSHLQKYR 288 89****************99***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 434 aa Download sequence
MEARPALSVQ REGAHPLGNC GAHSSLPVLR ASLEEKYPKF PEPVLSSLPS NSGSVGHLFS 60 SSSEFSTNLH FSSVLPHEEH SASAPFIPQA TNTEASVRLA ASNQYVNENS EPWCIDPLSE 120 YLDYSLNTPV NNTQLDCSNT GDCHIPPEDL SKQSDWPEWA NLIMNDDDAL SNWNEIMVDT 180 GIVDAAEPKM QYQEQNQPSN IPAHQGQQLQ QIPSASLETS GIVPASSTAS GASSKQRMRW 240 TPELHEAFVE AVNKLGGSER ATPKGVLKLM KVEGLTIYHV KSHLQKYRTA RYKPEASEGS 300 EKKESSIGDL SSLDLKTGIE ITEALRLQME VQKQLHEQLE IQRNLQLRIE EQGRCLQMMF 360 EKQCKSMPGI DASAQPTDAV QSSSNKNDPG VSLVDHHEAG DTTQKTVGEK QKEHGREDTS 420 SSNSPPSKRA KVDE

Sequence ? help Back to Top

Protein Sequence Length: 434 aa Download sequence

MEARPALSVQ REGAHPLGNC GAHSSLPVLR ASLEEKYPKF PEPVLSSLPS NSGSVGHLFS  60
SSSEFSTNLH FSSVLPHEEH SASAPFIPQA TNTEASVRLA ASNQYVNENS EPWCIDPLSE  120
YLDYSLNTPV NNTQLDCSNT GDCHIPPEDL SKQSDWPEWA NLIMNDDDAL SNWNEIMVDT  180
GIVDAAEPKM QYQEQNQPSN IPAHQGQQLQ QIPSASLETS GIVPASSTAS GASSKQRMRW  240
TPELHEAFVE AVNKLGGSER ATPKGVLKLM KVEGLTIYHV KSHLQKYRTA RYKPEASEGS  300
EKKESSIGDL SSLDLKTGIE ITEALRLQME VQKQLHEQLE IQRNLQLRIE EQGRCLQMMF  360
EKQCKSMPGI DASAQPTDAV QSSSNKNDPG VSLVDHHEAG DTTQKTVGEK QKEHGREDTS  420
SSNSPPSKRA KVDE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G28610.1	1e-78	G2-like family protein