PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHT44404.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | NAC | ||||||||
Protein Properties | Length: 178aa MW: 20596.2 Da PI: 5.6536 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 46.1 | 1.6e-14 | 8 | 134 | 3 | 128 |
NAM 3 pGfrFhPtdeelvveyLkkkvegkkleleev.ikevdiykv..ePwdLpk....kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevls 94 GfrFhPtd e + +L+k +++++++ + + +++d+y++ +Pw++ + + a ++++y ++ ++k + + g Wk + + k+v++ PHT44404.1 8 SGFRFHPTDTEGL-TFLQKFMAKQEMNDSGFiTTNIDVYDSeeDPWKIYSrgvpC-GAADDSLYRYFITKK----------SSNLGNWKLQSEGKPVHR 94 7**********99.99*********99988834556***88558****7334432.334444543333222..........234699**********99 PP NAM 95 k...kgelvglkktLvfy...kgrapkgektdWvmheyrl 128 ++ ++g+kk + + ++++++ W+m+ey+l PHT44404.1 95 DsssSTVVIGCKKKMCYMinnNEEHREDDGHYWLMKEYEL 134 86555566**********55433444445678******97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 178 aa Download sequence |
MGQRGVRSGF RFHPTDTEGL TFLQKFMAKQ EMNDSGFITT NIDVYDSEED PWKIYSRGVP 60 CGAADDSLYR YFITKKSSNL GNWKLQSEGK PVHRDSSSST VVIGCKKKMC YMINNNEEHR 120 EDDGHYWLMK EYELSNVILH QFDDDRRDYV LCAIKKKFIE TCLSEMGNVS EEFGAIQV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G17730.1 | 1e-09 | NAC family protein |