PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT44314.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

NAC

Protein Properties

Length: 356aa MW: 40240.9 Da PI: 8.2039

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT44314.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	165.6	1.7e-51	14	143	1	129
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleev..ikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkg 97 lppGfrFhP+deel+++yL kk+++++ + ++ + evd++k+ePw++p+ + + kewyf+s+rd+kyatg r+nrat sgyWkatgkd++v++ kg PHT44314.1 14 LPPGFRFHPRDEELICDYLMKKIDQSPDQQQQYpfLIEVDLNKSEPWEIPELACVGGKEWYFYSQRDRKYATGLRTNRATVSGYWKATGKDRAVVR-KG 111 79**********************96665533499*********7666689**********************************9.99 PP NAM 98 elvglkktLvfykgrapkgektdWvmheyrle 129 +lvg++ktLvfy+grapkg+k+dWvmhe+rle PHT44314.1 112 SLVGMRKTLVFYQGRAPKGRKSDWVMHEFRLE 143 9**************************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 356 aa Download sequence
MSNNSSLSMV ESKLPPGFRF HPRDEELICD YLMKKIDQSP DQQQQYPFLI EVDLNKSEPW 60 EIPELACVGG KEWYFYSQRD RKYATGLRTN RATVSGYWKA TGKDRAVVRK GSLVGMRKTL 120 VFYQGRAPKG RKSDWVMHEF RLEGPLNNNV RPQISSPRED WVLCRVFHKN KELLAAKQGT 180 SSNNIYYDNG TISSSSLPQL MENPYITFDQ TQPNNNNINM NELYYEQVPC FSIFTPNQTT 240 FTSHSHHHHH PATSTTTGAT PITTAYGGFP ADIGNYLNAT ATSSTCDNKV IKAVLSHLST 300 KNIIMEGNNN NSNFNNSSAQ NIMNIKGGNS PSFGEVSSET SFLSEVAYHP TMWNNY

Sequence ? help Back to Top

Protein Sequence Length: 356 aa Download sequence

MSNNSSLSMV ESKLPPGFRF HPRDEELICD YLMKKIDQSP DQQQQYPFLI EVDLNKSEPW  60
EIPELACVGG KEWYFYSQRD RKYATGLRTN RATVSGYWKA TGKDRAVVRK GSLVGMRKTL  120
VFYQGRAPKG RKSDWVMHEF RLEGPLNNNV RPQISSPRED WVLCRVFHKN KELLAAKQGT  180
SSNNIYYDNG TISSSSLPQL MENPYITFDQ TQPNNNNINM NELYYEQVPC FSIFTPNQTT  240
FTSHSHHHHH PATSTTTGAT PITTAYGGFP ADIGNYLNAT ATSSTCDNKV IKAVLSHLST  300
KNIIMEGNNN NSNFNNSSAQ NIMNIKGGNS PSFGEVSSET SFLSEVAYHP TMWNNY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G56010.2	1e-101	NAC family protein