PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT44172.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family WRKY
Protein Properties Length: 318aa    MW: 36500.1 Da    PI: 7.1361
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT44172.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY106.11.8e-33175232259
                 --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                 +Dgy+WrKYGqK vk+s+fprsYYrCts++C+vkk+vers +dp++v++tYeg+Hnh+
  PHT44172.1 175 EDGYRWRKYGQKAVKNSPFPRSYYRCTSQKCSVKKRVERSYQDPSIVITTYEGQHNHH 232
                 8********************************************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 318 aa     Download sequence    
MSDNNPFHHD YAFPFFGENP SIYDHQVENT QNPHQDFDYP SSYMSSLTEC LHGGSMDHYN  60
SLSSAFGMNH RTSSSEVVCP PPIDHHHHQE LSRKNSVDHH HQIPLTPNSL ISSSSNSEPG  120
CHEEDSSKIK KDDQCEDGGD DDKSKKVNKA KKKGEKKQKE PRFAFMTKSE IDNLEDGYRW  180
RKYGQKAVKN SPFPRSYYRC TSQKCSVKKR VERSYQDPSI VITTYEGQHN HHCPATLRGN  240
AAAALLSPAS FLSSSQQQLF HNPSEQQLFY NPNLPINNSF YNNYHQHQHQ MQPQLGPDNY  300
QYGVFQDMVA SLIHKREP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G29860.17e-46WRKY family protein