PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT43888.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family GeBP
Protein Properties Length: 348aa    MW: 39606.1 Da    PI: 3.6935
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT43888.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF57340.29.7e-132553391297
      DUF573  12 eivlLqGlidfkaktgkspsd.didafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiWg 97 
                 ++++L+ ++dfk + g sp+   +d +y+++    ++++s+++l eKi   K+ f+k +k   +g++ +++++ dq+ f+l+++iWg
  PHT43888.1 255 DVAILRSILDFKCHYGYSPHPpSLDLIYHIMTAVPHLEISREELREKIIAYKENFNKVRKL--EGDNLQMDRPIDQEFFDLCMRIWG 339
                 589*****************999************************************99..***********************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 348 aa     Download sequence    
MVSSSSPIPD PPQAYESASD IMKEENEEEV VISDASPTNN CTGLALSGRK RLRTDEEEDG  60
NATSDANKSS NGEEDEEEEE GEKEVDGQNE NQESKQGERG KNGNQENKNG EEEEAGGSLL  120
GEADENQEEN DNEEEDSREN TGGDGNVIHQ NSEQNGSGNQ ESEGDEGDED TENDDNQEEN  180
DDQEEDEEEY ELVIEEDDNE EEEEEEEEEE EEEEVEDEEE RRRRRAAEKG KQQVSEQGGL  240
SVTEYYVDYD ADPLDVAILR SILDFKCHYG YSPHPPSLDL IYHIMTAVPH LEISREELRE  300
KIIAYKENFN KVRKLEGDNL QMDRPIDQEF FDLCMRIWGN QDDDDGLR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G28040.12e-06GeBP family protein