PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHT43887.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | GeBP | ||||||||
Protein Properties | Length: 231aa MW: 26983.5 Da PI: 3.8412 | ||||||||
Description | GeBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF573 | 41.3 | 4.3e-13 | 138 | 222 | 12 | 97 |
DUF573 12 eivlLqGlidfkaktgkspsd.didafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiWg 97 ++++L+ ++dfk + g sp+ +d +y+++ ++++s+++l eKi K+ f+k +k +g++ +++++ dq+ f+l+++iWg PHT43887.1 138 DVAILRSILDFKCHYGYSPHPpSLDLIYHIMTAVPHLEISREELREKIIAYKENFNKVRKL--EGDNLQMDRPIDQEFFDLCMRIWG 222 589*****************999************************************99..***********************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 231 aa Download sequence |
MLESTSPPRS ASTKPCRITS PLPKQSEXNV IHQNSEQNGS GNQESEGDEG DEDTENDDNQ 60 EENDDQEEDE EEYELVIEED DNEEEEEEEE EEEEEEEVED EEERRRRRAA EKGKQQVSEQ 120 GGLSVTEYYV DYDADPLDVA ILRSILDFKC HYGYSPHPPS LDLIYHIMTA VPHLEISREE 180 LREKIIAYKE NFNKVRKLEG DNLQMDRPID QEFFDLCMRI WGNQDDDDGL R |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G28040.1 | 2e-06 | GeBP family protein |