PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT43865.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

GeBP

Protein Properties

Length: 591aa MW: 68162.5 Da PI: 3.4849

Description

GeBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT43865.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF573	31.9	3.8e-10	484	568	12	97
DUF573 12 eivlLqGlidfkaktgkspsddidafyefvkksi.sfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiWg 97 ++++L+ + +f ++g p ++ d++++ +++si ++k+ k++l+eK+ + + f++ + +g++p+++++ +++if+ls+++Wg PHT43865.1 484 DLAILRSIWNFYCNNGYIPDSHSDELHKHIRDSIpKLKILKQDLIEKVIAFEDNFNTVRLL--EGDNPEMEQPVNREIFDLSMRLWG 568 689*****************************558****************9998..9********************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 591 aa Download sequence
MLGAGEQVPG NGGFSSSSST SSSPIPDPPP PQLDENTDNQ LAAIDILETE LQCDESLTEI 60 IKEVKEEEEE DKGLMSDECS TNCTGFELNE CERLRTDEEE AEGKRELDGQ NENQELEQEE 120 SGDHGNQESE PDEEEEDGSQ ENNNGGEEEN EEEGGNQENS NEEEEKEEEA EEENEEETEE 180 SDDEGEEEEP GENQSGDPDE DRNRGRKRKR ALSEQNEESD EDSNGGRQRT RNSETEEVPD 240 GGRKRKRPSS DQNQEENDDD EEEEEENSEN EGSENKESGN QESEEDEENY ENQEENEEEE 300 EEDEEEEEEE EEEEDEEEEV DDDDDDDDEE EQDDDDEEEE DDDDEEEEEE EEEEKAEDGE 360 HDENQEENDN NEEEDGDVDD EEEEVEEEEE AKEEVDDREH DENQEENDDK VEEDGVVDDE 420 EEERRRRAAE KAKRPMSEIY QLESVEVEFS KIEEGGPSEI HVVNQTELTD HELNNDDDYD 480 FHQDLAILRS IWNFYCNNGY IPDSHSDELH KHIRDSIPKL KILKQDLIEK VIAFEDNFNT 540 VRLLEGDNPE MEQPVNREIF DLSMRLWGNT EDNAGDDDAE QQNQAAGAAD D

Sequence ? help Back to Top

Protein Sequence Length: 591 aa Download sequence

MLGAGEQVPG NGGFSSSSST SSSPIPDPPP PQLDENTDNQ LAAIDILETE LQCDESLTEI  60
IKEVKEEEEE DKGLMSDECS TNCTGFELNE CERLRTDEEE AEGKRELDGQ NENQELEQEE  120
SGDHGNQESE PDEEEEDGSQ ENNNGGEEEN EEEGGNQENS NEEEEKEEEA EEENEEETEE  180
SDDEGEEEEP GENQSGDPDE DRNRGRKRKR ALSEQNEESD EDSNGGRQRT RNSETEEVPD  240
GGRKRKRPSS DQNQEENDDD EEEEEENSEN EGSENKESGN QESEEDEENY ENQEENEEEE  300
EEDEEEEEEE EEEEDEEEEV DDDDDDDDEE EQDDDDEEEE DDDDEEEEEE EEEEKAEDGE  360
HDENQEENDN NEEEDGDVDD EEEEVEEEEE AKEEVDDREH DENQEENDDK VEEDGVVDDE  420
EEERRRRAAE KAKRPMSEIY QLESVEVEFS KIEEGGPSEI HVVNQTELTD HELNNDDDYD  480
FHQDLAILRS IWNFYCNNGY IPDSHSDELH KHIRDSIPKL KILKQDLIEK VIAFEDNFNT  540
VRLLEGDNPE MEQPVNREIF DLSMRLWGNT EDNAGDDDAE QQNQAAGAAD D

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	205	211	GRKRKRA