PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHT43859.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | NF-YC | ||||||||
Protein Properties | Length: 120aa MW: 13352.5 Da PI: 10.5258 | ||||||||
Description | NF-YC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YC | 26.9 | 1e-08 | 28 | 106 | 19 | 97 |
NF-YC 19 helPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdivp 97 ++P+ ri + l+ + v++i +eaP++l+ e++ e+ + + a++nkr+ + i+ +v + + + l+d+v+ PHT43859.1 28 LQFPVGRIAHFLRIGKYVQRIVTEAPIFLAADFEYLATEVLEIAGNVARDNKRSRIVPRHIQLTVRHDEELNTLLDDVI 106 589*****************************************************************99999999886 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 120 aa Download sequence |
MATKGKTLTF DSSPSGKKSL ARSKKAGLQF PVGRIAHFLR IGKYVQRIVT EAPIFLAADF 60 EYLATEVLEI AGNVARDNKR SRIVPRHIQL TVRHDEELNT LLDDVIICSS GVIPKNHKNL |