PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT43772.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family NAC
Protein Properties Length: 335aa    MW: 37397.1 Da    PI: 6.9259
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT43772.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM166.68.4e-52141391128
         NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgel 99 
                 lppGfrF Ptdeel+veyL++kv+g+ +el ++i+evd+yk++Pw Lp+k+  +ekewyfFs+rd+ky++g+r+nr++ sgyWkatg+dk v s +g+ 
  PHT43772.1  14 LPPGFRFYPTDEELLVEYLCRKVAGHIFEL-QIIAEVDLYKFDPWVLPNKAIFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKVVAS-EGRR 110
                 79**************************99.89***************8777899***********************************9999.9999 PP

         NAM 100 vglkktLvfykgrapkgektdWvmheyrl 128
                 vg+kk Lvfy g+apkg+kt+W+mheyrl
  PHT43772.1 111 VGIKKALVFYVGKAPKGTKTNWIMHEYRL 139
                 ***************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 335 aa     Download sequence    
MGLQEPDPLK QLNLPPGFRF YPTDEELLVE YLCRKVAGHI FELQIIAEVD LYKFDPWVLP  60
NKAIFGEKEW YFFSPRDRKY PNGSRPNRVA GSGYWKATGT DKVVASEGRR VGIKKALVFY  120
VGKAPKGTKT NWIMHEYRLC EPSRKIGSPR LDDWVLCRIY KKNVAAPKPG SCDLRNKDIS  180
HGGSSSSSSS LFGDMLEALP VIEDRYFSLP QMNFQQSDTN LSLQQFGSGN FDWAQSLFPE  240
LATQNPASVP PPAAPPMLVN NQNNLNNLNE FFANSTALNF HEEVKNEGGA EQEVQSSVNN  300
PGFYPVNSTG LPGTDPFGIR YPTQTQTVGA GFTTQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27410.21e-112NAC family protein