PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHT43771.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | NAC | ||||||||
Protein Properties | Length: 336aa MW: 37667.3 Da PI: 8.7008 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 172.1 | 1.8e-53 | 16 | 143 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kge 98 lppGfrFhPtdeelvv+yLkkk+++ +l++ ++i+evd+yk++Pw+Lp+k++ +e+ewyfFs+rd+ky++g r+nra++sgyWkatg+dk+vl++ +++ PHT43771.1 16 LPPGFRFHPTDEELVVHYLKKKIASVPLPV-SIIAEVDLYKFDPWELPAKATFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPVLTAgGTQ 113 79****************************.89***************988899***************************************997778 PP NAM 99 lvglkktLvfykgrapkgektdWvmheyrl 128 +vg+kk Lvfy g+ pkg+k++W+mheyrl PHT43771.1 114 KVGVKKALVFYGGKPPKGVKSNWIMHEYRL 143 8***************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 336 aa Download sequence |
MESTDSSSGS HQQPQLPPGF RFHPTDEELV VHYLKKKIAS VPLPVSIIAE VDLYKFDPWE 60 LPAKATFGEQ EWYFFSPRDR KYPNGARPNR AATSGYWKAT GTDKPVLTAG GTQKVGVKKA 120 LVFYGGKPPK GVKSNWIMHE YRLAENKANN KPPGCDLANK KSLRLDDWVL CRIYKKSNTQ 180 RPIDHERDDL NIDMMMGSSS INPSCIPNNS MSLPNLFGQP KIPQLKSSNF GSALLENEPN 240 LYDQSGSQFS SKRPLANLYW NDQDGAASND NSHQSTKRFL TDSMEDGLNM NVRADEHNGS 300 IVSLLSQLPQ TPSLHQQQLL GDGVFRQPYS GMNWYS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G15510.1 | 1e-109 | NAC family protein |