PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT43527.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

G2-like

Protein Properties

Length: 447aa MW: 48710 Da PI: 6.9213

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT43527.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	87.6	1.2e-27	162	216	1	56
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 k +++WtpeLH+rFv+aveqL G +kA+P++ile+m++++Lt+++++SHLQkYR++ PHT43527.1 162 KVKVDWTPELHRRFVQAVEQL-GVDKAVPSRILEIMGIDCLTRHNIASHLQKYRSH 216 5689***************.******************************86 PP
2	Myb_DNA-binding	37.8	4.5e-12	165	214	2	48
SSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 WT+e++ ++v+av+qlG + +++I + mg +t+ ++ s++qky+ PHT43527.1 165 VDWTPELHRRFVQAVEQLGVDkaVPSRILEIMGiDCLTRHNIASHLQKYR 214 57******************************889**********7 PP

Sequence ? help Back to Top
Protein Sequence Length: 447 aa Download sequence
MLAVSPLSNT TARDDNTMES FAIGGGVDFP DFVGENLLDS IDFDDLFVGI NDGDVLPDLE 60 MDTEILAEFS VSSGDESDVN NYSSSNKTTF ISTATKNVER KDETERAASD VGSGLTSLNQ 120 GEEIVSTQKS EESTLQVKQN VTPKESDKGK KSSKNNLPGK RKVKVDWTPE LHRRFVQAVE 180 QLGVDKAVPS RILEIMGIDC LTRHNIASHL QKYRSHRKHL LAREAEAASW SQRRQLYGGA 240 AVVGGGGGKR DMTPWPAPTI GFPPPPTMAA PMPHHFRPLH VWGHPSVDQS YMHMWPKHLA 300 PSPSPQHPSP AWAPPPHLHP PPPSDPSFWH PHHQRVPNPL TPGTPYFPAP IAPTRYPGGH 360 HPVPGIPPAA HAMYKVDHVR STAPPTQPLP KPPCDFHPSK ESIDAAIGDV LSKPWLPLPL 420 GLKPPAVDSV LGELQRQGVP KIPPTCA

Sequence ? help Back to Top

Protein Sequence Length: 447 aa Download sequence

MLAVSPLSNT TARDDNTMES FAIGGGVDFP DFVGENLLDS IDFDDLFVGI NDGDVLPDLE  60
MDTEILAEFS VSSGDESDVN NYSSSNKTTF ISTATKNVER KDETERAASD VGSGLTSLNQ  120
GEEIVSTQKS EESTLQVKQN VTPKESDKGK KSSKNNLPGK RKVKVDWTPE LHRRFVQAVE  180
QLGVDKAVPS RILEIMGIDC LTRHNIASHL QKYRSHRKHL LAREAEAASW SQRRQLYGGA  240
AVVGGGGGKR DMTPWPAPTI GFPPPPTMAA PMPHHFRPLH VWGHPSVDQS YMHMWPKHLA  300
PSPSPQHPSP AWAPPPHLHP PPPSDPSFWH PHHQRVPNPL TPGTPYFPAP IAPTRYPGGH  360
HPVPGIPPAA HAMYKVDHVR STAPPTQPLP KPPCDFHPSK ESIDAAIGDV LSKPWLPLPL  420
GLKPPAVDSV LGELQRQGVP KIPPTCA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G20570.1	2e-64	G2-like family protein