PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT43525.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

HB-other

Protein Properties

Length: 1774aa MW: 199887 Da PI: 5.3245

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT43525.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	56.5	4.6e-18	39	93	3	57
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 kR t++qle+Le+ ++ + yps++ r+eL+ klgL++rq ++WF+ rR k++k PHT43525.1 39 KRKMKTASQLEILEKTYATDTYPSEALRAELSVKLGLSDRQLQMWFCHRRLKDRK 93 89999************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 1774 aa Download sequence
MESAAAAVPM AVATASDGVG ASDDVEKKKP PEGGEPKVKR KMKTASQLEI LEKTYATDTY 60 PSEALRAELS VKLGLSDRQL QMWFCHRRLK DRKATPVKRQ KKEEASPAAV VSSGGQVDEM 120 AAVSGEIGKE HASGSGSRVI PLGGGLMDLQ VQQQHHQRVV HRPGTAVPRF RAEMPALKRY 180 YEPPQAISEL RAIAFVEAQL GEPLREDGPI LGMEFDPLPP GAFGAPIVAD TQHKPAGRPF 240 EAQIYERQDV NSIKGTTRTL REYQFLPEQP SNRSNSYEQS IPSHYYSSTE VQSTRTMLST 300 GRHGSEQVAS GYSIPGQIPT LNLLPPGRQG HISPASAEAE AAPQRSLVNI EVEANYSGQP 360 MMKLESPFMS SDKRIIHDEE RLERKRKSEE ARIAREVDAH EKRIRKELEK QDMLRRKREE 420 QMRKDMERQD RERRKEEERL VREKQREEER YQREQRREME RREKFLQKEY MKAERMRLKE 480 EMRREKEVAR LKAANVRATA RRIAKESTEL IDDERLELME LAASKKGLPS TLSLDTETLQ 540 NLEAFRDMLN EFPPKSVCLR KPFGVEPWIC SEEDVGNLLM VWRFLITFTD VLHLWPFTLD 600 EFVQAFHDYE PRLLAEMHIA LLKLIIKDIE DVARTPAGAA AANPNSGASP GGGHPDIVEG 660 AYAWGFDIRS WQSHLNSLTW PEILRQFALS AGFGPQLKKS SVEPAYPRDE NECKNGADII 720 SNLRSGVAAQ KAVVKMQERG FSNLRRSRHR LTPGTVKFAA FHVLSLEGSQ GLNILEVAEK 780 IQKSGLRDLT TSKTPEASIS AALSRDTKLF ERTAPSTYCV RDPYRKDPVD ADAILSAARE 840 KIRLFKNEYV NGEEAEDVDK EVERDDESES DAADDPEVDD LVSELKFAET PESHKTGRTD 900 GKNSSFDLTR TPEDLSMQNS TGIMHSQSFR ESKPVGTSGD QSTAGDVDAS NLNQENAVID 960 ESNAGQKWVQ GLMEGEYSDL TVEERLHALV ALIGVANEGN SVRLVLEERL ESASALKKQI 1020 WAEAQLDKRR FKEEFLLKVQ YPSIRNNGEQ FGSVTSVEAR QSPLLAVGGH NGVADILSLQ 1080 QEAMHKLPDE PINPSNAAVE KTCPMQEIYG GQDNSQLQHF ACVAEKSRSQ LKAYIGYRAE 1140 ETFVYRSLPL GQDRRRNRYW QFVTSPSRYD PGSGRIFVEL CDGRWRLIDS EKDFNALMAS 1200 LDIRGLRESH LHSMLQNIEA TFKETARKHK YTDEKLGNSV KEDTSERVPS NDCCSNTDSL 1260 KSTTCISNCE TREPSTSFLI GFGRNKMENT NALRRYADLE KWMWEECVDS QFLCARKYGR 1320 MRSENLIGIC NNCHDTYFWE DKHCPSCHRT FSPVKSSYFI EHVAQCKEKL EDLFLPLCIL 1380 DSLPALRVRL LRAQLASVEA CIPPEALQPV WSEVYRRSWG SKLHIASTAG DLLQILTLLE 1440 GAIKGEYLIS DYETTSELLG AVSNSNLDGM AVLPWVPHTT SAVALRLMEL DSSLCYTQQQ 1500 KADSLKDDKP PDFIIKTNYD EVKRVAGIVS VEGHEYEKLE PDFTVKVGGR HANSAQGRNR 1560 VRGGTHCRIR GGKSQRKVNA SRSESAQRSS MKNNDRLDHL LAWKGRDGGK GRRKKGRRSV 1620 RNRQKPVKNV EEVTVEEVPL SNQQDWNEVE DGETPQFEAP DNDSDSGTSG NEDYKGQVTI 1680 DDYEDLMVDD YGSFTDRTDH ASASVSYSIG RPYTETAEGG DGVGDYEDDR DEEEDENVQG 1740 YFDGEFEEEG NRFGDEEYVE TPNKDSESSS EYSD

Sequence ? help Back to Top

Protein Sequence Length: 1774 aa Download sequence

MESAAAAVPM AVATASDGVG ASDDVEKKKP PEGGEPKVKR KMKTASQLEI LEKTYATDTY  60
PSEALRAELS VKLGLSDRQL QMWFCHRRLK DRKATPVKRQ KKEEASPAAV VSSGGQVDEM  120
AAVSGEIGKE HASGSGSRVI PLGGGLMDLQ VQQQHHQRVV HRPGTAVPRF RAEMPALKRY  180
YEPPQAISEL RAIAFVEAQL GEPLREDGPI LGMEFDPLPP GAFGAPIVAD TQHKPAGRPF  240
EAQIYERQDV NSIKGTTRTL REYQFLPEQP SNRSNSYEQS IPSHYYSSTE VQSTRTMLST  300
GRHGSEQVAS GYSIPGQIPT LNLLPPGRQG HISPASAEAE AAPQRSLVNI EVEANYSGQP  360
MMKLESPFMS SDKRIIHDEE RLERKRKSEE ARIAREVDAH EKRIRKELEK QDMLRRKREE  420
QMRKDMERQD RERRKEEERL VREKQREEER YQREQRREME RREKFLQKEY MKAERMRLKE  480
EMRREKEVAR LKAANVRATA RRIAKESTEL IDDERLELME LAASKKGLPS TLSLDTETLQ  540
NLEAFRDMLN EFPPKSVCLR KPFGVEPWIC SEEDVGNLLM VWRFLITFTD VLHLWPFTLD  600
EFVQAFHDYE PRLLAEMHIA LLKLIIKDIE DVARTPAGAA AANPNSGASP GGGHPDIVEG  660
AYAWGFDIRS WQSHLNSLTW PEILRQFALS AGFGPQLKKS SVEPAYPRDE NECKNGADII  720
SNLRSGVAAQ KAVVKMQERG FSNLRRSRHR LTPGTVKFAA FHVLSLEGSQ GLNILEVAEK  780
IQKSGLRDLT TSKTPEASIS AALSRDTKLF ERTAPSTYCV RDPYRKDPVD ADAILSAARE  840
KIRLFKNEYV NGEEAEDVDK EVERDDESES DAADDPEVDD LVSELKFAET PESHKTGRTD  900
GKNSSFDLTR TPEDLSMQNS TGIMHSQSFR ESKPVGTSGD QSTAGDVDAS NLNQENAVID  960
ESNAGQKWVQ GLMEGEYSDL TVEERLHALV ALIGVANEGN SVRLVLEERL ESASALKKQI  1020
WAEAQLDKRR FKEEFLLKVQ YPSIRNNGEQ FGSVTSVEAR QSPLLAVGGH NGVADILSLQ  1080
QEAMHKLPDE PINPSNAAVE KTCPMQEIYG GQDNSQLQHF ACVAEKSRSQ LKAYIGYRAE  1140
ETFVYRSLPL GQDRRRNRYW QFVTSPSRYD PGSGRIFVEL CDGRWRLIDS EKDFNALMAS  1200
LDIRGLRESH LHSMLQNIEA TFKETARKHK YTDEKLGNSV KEDTSERVPS NDCCSNTDSL  1260
KSTTCISNCE TREPSTSFLI GFGRNKMENT NALRRYADLE KWMWEECVDS QFLCARKYGR  1320
MRSENLIGIC NNCHDTYFWE DKHCPSCHRT FSPVKSSYFI EHVAQCKEKL EDLFLPLCIL  1380
DSLPALRVRL LRAQLASVEA CIPPEALQPV WSEVYRRSWG SKLHIASTAG DLLQILTLLE  1440
GAIKGEYLIS DYETTSELLG AVSNSNLDGM AVLPWVPHTT SAVALRLMEL DSSLCYTQQQ  1500
KADSLKDDKP PDFIIKTNYD EVKRVAGIVS VEGHEYEKLE PDFTVKVGGR HANSAQGRNR  1560
VRGGTHCRIR GGKSQRKVNA SRSESAQRSS MKNNDRLDHL LAWKGRDGGK GRRKKGRRSV  1620
RNRQKPVKNV EEVTVEEVPL SNQQDWNEVE DGETPQFEAP DNDSDSGTSG NEDYKGQVTI  1680
DDYEDLMVDD YGSFTDRTDH ASASVSYSIG RPYTETAEGG DGVGDYEDDR DEEEDENVQG  1740
YFDGEFEEEG NRFGDEEYVE TPNKDSESSS EYSD

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	28	41	KKPPEGGEPKVKRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G44180.1	0.0	HB-other family protein