PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHT43498.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | SBP | ||||||||
Protein Properties | Length: 182aa MW: 20704.7 Da PI: 10.1674 | ||||||||
Description | SBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SBP | 132.7 | 1.2e-41 | 44 | 118 | 2 | 76 |
-SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S- CS SBP 2 CqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkk 76 Cq+e+C++dls+ak+yh+rhkvCe h+k++vv+v+gl+qrfCqqCsrfhel+efDe+krsCrrrLa+hnerrrk+ PHT43498.1 44 CQAEKCSVDLSDAKQYHKRHKVCENHAKSQVVVVAGLRQRFCQQCSRFHELTEFDESKRSCRRRLAGHNERRRKS 118 *************************************************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 182 aa Download sequence |
METTNNQLKS MEKNDDMLSI IEDAKKKNKK GSPNSSSSSL TRSCQAEKCS VDLSDAKQYH 60 KRHKVCENHA KSQVVVVAGL RQRFCQQCSR FHELTEFDES KRSCRRRLAG HNERRRKSIS 120 SSSSSADQSH NNNNNNNNNN TAEGSNRKGT VTMCGQVDER GRIHISIQDN NNNNSTYKNF 180 HR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G15270.1 | 6e-40 | SBP family protein |