PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT43127.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

GeBP

Protein Properties

Length: 407aa MW: 44945 Da PI: 5.2791

Description

GeBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT43127.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF573	107.9	7.3e-34	159	250	3	97
DUF573 3 fqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiWg 97 +++lwse+D++++L+G++++k+++g++p +d++afyef++++++++vsksql++KirrLKkKf + vk+ g++p fsk++d ++e+s++iWg PHT43127.1 159 PRSLWSEDDQVAILKGMVEYKQEKGTEPNADMSAFYEFIRGKLQADVSKSQLSDKIRRLKKKFMTSVKD---GEQPGFSKTQDWLVYEYSNQIWG 250 6789***********************************************************9999...********************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 407 aa Download sequence
MAPKAKSRLV DQPPSASSSE EEQVEESQEE EEQEEQSEEG QEEESGEETE EGEPPKKPIT 60 QKSLQTQPKP VHSSSESGTE NGSGSESQTD SGHSGQSLPS PSASDFTVKP SVPVKAAVPS 120 KEPAKRPPPQ EQAQKESKDS RKKKPKIAEE EEKKASATPR SLWSEDDQVA ILKGMVEYKQ 180 EKGTEPNADM SAFYEFIRGK LQADVSKSQL SDKIRRLKKK FMTSVKDGEQ PGFSKTQDWL 240 VYEYSNQIWG APSNNIVKEN VSSSANGKAK KAAADAVKKI AEPKKSGKVS TLNKAKDNEK 300 RKDEEKEKKV AAIEVVKEDI VNDDKQDFQS KYPRLAASFE SLGGMSMIYP NGTSWLKEKM 360 SSIASDKAKV LEEKWKKLDD AEAALILKRL DLIREHCGLV VDGTRGN

Sequence ? help Back to Top

Protein Sequence Length: 407 aa Download sequence

MAPKAKSRLV DQPPSASSSE EEQVEESQEE EEQEEQSEEG QEEESGEETE EGEPPKKPIT  60
QKSLQTQPKP VHSSSESGTE NGSGSESQTD SGHSGQSLPS PSASDFTVKP SVPVKAAVPS  120
KEPAKRPPPQ EQAQKESKDS RKKKPKIAEE EEKKASATPR SLWSEDDQVA ILKGMVEYKQ  180
EKGTEPNADM SAFYEFIRGK LQADVSKSQL SDKIRRLKKK FMTSVKDGEQ PGFSKTQDWL  240
VYEYSNQIWG APSNNIVKEN VSSSANGKAK KAAADAVKKI AEPKKSGKVS TLNKAKDNEK  300
RKDEEKEKKV AAIEVVKEDI VNDDKQDFQS KYPRLAASFE SLGGMSMIYP NGTSWLKEKM  360
SSIASDKAKV LEEKWKKLDD AEAALILKRL DLIREHCGLV VDGTRGN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G00390.1	3e-21	GeBP family protein