PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT42637.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

bHLH

Protein Properties

Length: 506aa MW: 55138.3 Da PI: 4.8052

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT42637.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	28.9	2e-09	318	366	3	55
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L++l+P + +k Ka +L + ++Y++sLq PHT42637.1 318 NSHSLAERIRREKISERMKYLQDLVPGC----NKVTGKAVMLDEIINYVQSLQ 366 58***********************9....677***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 506 aa Download sequence
MDVETKNDSE PENRNDQEVS MNYQSPNMSS EWQLSGSNLT NASSMGMVDS FCPTTWDQST 60 NSPNLGFCDG NGQMDLGPFR VGVDRSLGPS WTPSNAMLLK GGMFLPPAPM MLPQSLAQFP 120 TDSGFIERAA RFSCFSGGNF GDMNPFSIPE SSMNPYYRGL APMQGPQEVL ASNVAESSKD 180 VSLTVDHTDT ERSPLKNEKK RENFAKSQDE AREIAGVSGN ESDEAGCSGR QEEMEGAGEG 240 SYGKNIGSKK RKRGGQDTVP DQTKEAQQPP AEFLKGEQNL NSIASKPGGK NGKQGSQLSD 300 PTKEEYIHVR ARRGQATNSH SLAERIRREK ISERMKYLQD LVPGCNKVTG KAVMLDEIIN 360 YVQSLQRQVE FLSMKLATVN PRLDFDIDGL LEKDIFRSQA GPSSSLAFPP DMTMPYPPLH 420 PPHTGMLQSG LPSYGFSSDA FRRAINPHLA TTSCGPGDYK DPSSQAPNEW DTELHNIVQM 480 GLNSSAPLSS QDLSGSLPAG PMKEEP

Sequence ? help Back to Top

Protein Sequence Length: 506 aa Download sequence

MDVETKNDSE PENRNDQEVS MNYQSPNMSS EWQLSGSNLT NASSMGMVDS FCPTTWDQST  60
NSPNLGFCDG NGQMDLGPFR VGVDRSLGPS WTPSNAMLLK GGMFLPPAPM MLPQSLAQFP  120
TDSGFIERAA RFSCFSGGNF GDMNPFSIPE SSMNPYYRGL APMQGPQEVL ASNVAESSKD  180
VSLTVDHTDT ERSPLKNEKK RENFAKSQDE AREIAGVSGN ESDEAGCSGR QEEMEGAGEG  240
SYGKNIGSKK RKRGGQDTVP DQTKEAQQPP AEFLKGEQNL NSIASKPGGK NGKQGSQLSD  300
PTKEEYIHVR ARRGQATNSH SLAERIRREK ISERMKYLQD LVPGCNKVTG KAVMLDEIIN  360
YVQSLQRQVE FLSMKLATVN PRLDFDIDGL LEKDIFRSQA GPSSSLAFPP DMTMPYPPLH  420
PPHTGMLQSG LPSYGFSSDA FRRAINPHLA TTSCGPGDYK DPSSQAPNEW DTELHNIVQM  480
GLNSSAPLSS QDLSGSLPAG PMKEEP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68920.3	1e-111	bHLH family protein