PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT42454.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 355aa    MW: 39480.3 Da    PI: 4.3581
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT42454.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.73e-183787155
         AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
                ++ykGVr++  +g+WvAeIr+p   + r + ++lg+f+  ++Aa a++aa++kl+g
  PHT42454.1 37 CKYKGVRQRT-WGKWVAEIREP---N-RgACVWLGTFDNSYDAAVAYDAAALKLYG 87
                79*****999.**********8...3.35*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 355 aa     Download sequence    
MSSKFSLSPQ RRSKKPTQAT SRKGRMKGKG GPENATCKYK GVRQRTWGKW VAEIREPNRG  60
ACVWLGTFDN SYDAAVAYDA AALKLYGPDK VQLNLPHLYN IPAQAQHESS RPALTPAPAI  120
YNVASPSTWN VENDPSVYFN NDFSSTDFSA TSISLDMNEK ADHEEFVENV SSRPAPTLAP  180
APFSLVPSPS VYNVASPSTW NVENDPSLYF NNDFSSTDFS ATSFSLDMNE KADHEEFVKN  240
ESSRPAPIPV AAPVSLVPSP SIYNVASPST WNVEIDPSLY FNNDFEIDPT LYFNNDFAST  300
DFSATSFSLD MNEKADHEEF VEKNNQISQE LDEDMWSDLN LLPEIDDTYH RMGGS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75490.16e-33ERF family protein