PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT42453.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

ARR-B

Protein Properties

Length: 522aa MW: 58529.8 Da PI: 6.3277

Description

ARR-B family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT42453.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	61.6	1.6e-19	212	268	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGse..kAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+r+rWt+eLH++F++a qL k +Pk+ile+m+ + +t+e+v+SHLQk+R+ PHT42453.1 212 KNRMRWTKELHKKFMDAYYQLEADTfyKVVPKRILEIMNEPEVTREKVASHLQKFRS 268 78*****************6543339**************************7 PP
2	Myb_DNA-binding	26.3	1.7e-08	214	267	1	48
TSSS-HHHHHHHHHHHHHTTTT.....-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.....tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT+e+++++ da ql + +k+I + m+ t++ + s++qk++ PHT42453.1 214 RMRWTKELHKKFMDAYYQLEADtfykvVPKRILEIMNePEVTREKVASHLQKFR 267 89**********************************6678888*****97 PP
3	Response_reg	70.5	6.9e-24	30	138	1	109
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTES CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaGak 95 vl +dD+ + +++l ++l+k gy +v++++d+ ale+l++++ +D++++D+ ++dG++ll+ i e ++p+i+ +a++e ++++e +k Ga+ PHT42453.1 30 VLAIDDNVVCLKVLGSILQKCGY-IVTTTRDANVALEILRKNKenFDIVITDVVRDDIDGFKLLEAIGLEM-DIPVIMTSANDERTTIVEGIKHGAS 124 7899*****************.***********888778******************6654.8******************** PP EEEESS--HHHHHH CS Response_reg 96 dflsKpfdpeelvk 109 +l Kp+++e++ + PHT42453.1 125 NYLLKPIKMEDVKN 138 ******999876 PP

Sequence ? help Back to Top
Protein Sequence Length: 522 aa Download sequence
MSHSVTNECS NPPNLTKEKE TSKSPKGLKV LAIDDNVVCL KVLGSILQKC GYIVTTTRDA 60 NVALEILRKN KENFDIVITD VVRDDIDGFK LLEAIGLEMD IPVIMTSAND ERTTIVEGIK 120 HGASNYLLKP IKMEDVKNIF QHVTISINKN KATQDDHSST PISCNDTNEF GVQESSSSIL 180 PHKRISQQDN DDDEETNNDQ SSGKSCPPRK KKNRMRWTKE LHKKFMDAYY QLEADTFYKV 240 VPKRILEIMN EPEVTREKVA SHLQKFRSGL KKHKENLNQD STIATSCHPP GHYVTKPEIP 300 NMFANQKPYL VPRTQQIPNM FANQQNAANF APISTYPRLD NFIYCPVLAT NAISQPDLNG 360 LQYHYQNHHP RWIMDDEMLN SMPHHSVYLY PYSSIPVSMN YVGAPYHQMF GDLPVSHQMT 420 PSAPFDSSGL VVSSTHGQVQ GGNLVSFNDR GVQDFSVGAN SSPINFNGVQ IDDINDDSER 480 RSNVLENNSS SLDDDDLSTM VQQLDTKIPA ASKVWSSGKG VV

Sequence ? help Back to Top

Protein Sequence Length: 522 aa Download sequence

MSHSVTNECS NPPNLTKEKE TSKSPKGLKV LAIDDNVVCL KVLGSILQKC GYIVTTTRDA  60
NVALEILRKN KENFDIVITD VVRDDIDGFK LLEAIGLEMD IPVIMTSAND ERTTIVEGIK  120
HGASNYLLKP IKMEDVKNIF QHVTISINKN KATQDDHSST PISCNDTNEF GVQESSSSIL  180
PHKRISQQDN DDDEETNNDQ SSGKSCPPRK KKNRMRWTKE LHKKFMDAYY QLEADTFYKV  240
VPKRILEIMN EPEVTREKVA SHLQKFRSGL KKHKENLNQD STIATSCHPP GHYVTKPEIP  300
NMFANQKPYL VPRTQQIPNM FANQQNAANF APISTYPRLD NFIYCPVLAT NAISQPDLNG  360
LQYHYQNHHP RWIMDDEMLN SMPHHSVYLY PYSSIPVSMN YVGAPYHQMF GDLPVSHQMT  420
PSAPFDSSGL VVSSTHGQVQ GGNLVSFNDR GVQDFSVGAN SSPINFNGVQ IDDINDDSER  480
RSNVLENNSS SLDDDDLSTM VQQLDTKIPA ASKVWSSGKG VV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G25180.1	3e-54	ARR-B family protein