PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHT42347.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | NAC | ||||||||
Protein Properties | Length: 260aa MW: 30153.8 Da PI: 5.2652 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 79.9 | 5.4e-25 | 54 | 180 | 3 | 128 |
NAM 3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiyk.vePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk...kg 97 GfrFhPtdeel+ +yLk+ v + l+ ++ik +d+++ +ePw++ + +ee+ yf s+ ++ +++ k+ +r++ +g+Wk + + +++ ++ k+ PHT42347.1 54 EGFRFHPTDEELI-NYLKNFVLHGMLPPRDFIKLADLFEdLEPWEIM--AGSEEQTHYFLSRLKRFKNSTKKFSRTVGKGTWKGQNSCNPIEDNglkKN 149 6************.9**********999999****998626*****6..4455566677777788888889999******************9988777 PP NAM 98 elvglkktLvfykgrapkgektdWvmheyrl 128 +++g k++L + + ++++ ++ +W+m+ey l PHT42347.1 150 TTIGYKRSLKYKSDNEKDENNDKWLMKEYFL 180 88**********9999999**********76 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 260 aa Download sequence |
MVHRILDGPS GHSSHVGQDE AILPERDGPS DGPPQPQWSI VKGSFCLGCD GPSEGFRFHP 60 TDEELINYLK NFVLHGMLPP RDFIKLADLF EDLEPWEIMA GSEEQTHYFL SRLKRFKNST 120 KKFSRTVGKG TWKGQNSCNP IEDNGLKKNT TIGYKRSLKY KSDNEKDENN DKWLMKEYFL 180 PDEYFRKSSK NYTFVICKIK EKKKNKGVIN EDVMEEEVDD EFIDYVLESI PDNHQLITND 240 DDNQFAVNYE VMRTSTLHKD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G39820.1 | 6e-18 | NAC family protein |