PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT42166.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

NAC

Protein Properties

Length: 422aa MW: 47911.1 Da PI: 4.991

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT42166.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	148.5	3.4e-46	61	188	2	128
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkge 98 ppGfrF Ptd elv++yLk+k+++ +l+l + + e++iyk++P+ + + + +++ek wy F++rd+ky++g r+nr++ +gyWkatg dkevl++k++ PHT42166.1 61 PPGFRFYPTDAELVTHYLKRKLANLPLHL-NKMYELNIYKYNPEIIAAqvTPTTREKVWYIFTPRDRKYKNGYRPNRSAGNGYWKATGADKEVLDRKKN 158 9**************************.77**********842344457889************************************* PP NAM 99 lvglkktLvfykgrapkgektdWvmheyrl 128 +g+kktLvfy g+apkgektdW+mhe+r+ PHT42166.1 159 IIGMKKTLVFYIGKAPKGEKTDWIMHEFRV 188 **************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 422 aa Download sequence
MENHHSSPTN NANISEEDLN NITNANHINE LPVIAVLSNY DSNGKQIQSA EEIESTINSF 60 PPGFRFYPTD AELVTHYLKR KLANLPLHLN KMYELNIYKY NPEIIAAQVT PTTREKVWYI 120 FTPRDRKYKN GYRPNRSAGN GYWKATGADK EVLDRKKNII GMKKTLVFYI GKAPKGEKTD 180 WIMHEFRVPN VPTIAERGAN DMTLDDWVLC KIYKRTEIDN SMFTQRKRSR EDYDDIVEAL 240 DTSDGQAHDS SAENSRQAND FSAENSLFAS QDSTRHGFNY FDMSYNNPFC NMPWSTTSAY 300 DYQACAPQFN SGDAPLPMMI EPISSAMATN TSIGHDHTTK TEGFGMPCFG ACFVGGYTGQ 360 HGECVDHAKF INSNNTDQCD PNDCVDQYLV NNYEMIDYNT MCLPEYTTNN FVGESSKSKE 420 DC

Sequence ? help Back to Top

Protein Sequence Length: 422 aa Download sequence

MENHHSSPTN NANISEEDLN NITNANHINE LPVIAVLSNY DSNGKQIQSA EEIESTINSF  60
PPGFRFYPTD AELVTHYLKR KLANLPLHLN KMYELNIYKY NPEIIAAQVT PTTREKVWYI  120
FTPRDRKYKN GYRPNRSAGN GYWKATGADK EVLDRKKNII GMKKTLVFYI GKAPKGEKTD  180
WIMHEFRVPN VPTIAERGAN DMTLDDWVLC KIYKRTEIDN SMFTQRKRSR EDYDDIVEAL  240
DTSDGQAHDS SAENSRQAND FSAENSLFAS QDSTRHGFNY FDMSYNNPFC NMPWSTTSAY  300
DYQACAPQFN SGDAPLPMMI EPISSAMATN TSIGHDHTTK TEGFGMPCFG ACFVGGYTGQ  360
HGECVDHAKF INSNNTDQCD PNDCVDQYLV NNYEMIDYNT MCLPEYTTNN FVGESSKSKE  420
DC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G01720.1	8e-56	NAC family protein