PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT41992.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

G2-like

Protein Properties

Length: 407aa MW: 45342.9 Da PI: 8.4744

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT41992.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	104.8	4.9e-33	263	318	1	56
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 k+r++W+peLH+rFv+a++qLGGs++AtPk+i+elm+v+gLt+++vkSHLQkYRl+ PHT41992.1 263 KQRRCWSPELHRRFVDALQQLGGSQVATPKQIRELMQVDGLTNDEVKSHLQKYRLH 318 79****************************************************97 PP
2	Myb_DNA-binding	46.7	7.2e-15	265	316	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r W++e++ ++vda +qlGg t+k I + m+ g+t ++ks++qky+ PHT41992.1 265 RRCWSPELHRRFVDALQQLGGSqvaTPKQIRELMQvDGLTNDEVKSHLQKYR 316 568***************99***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 407 aa Download sequence
MGSIPPELSL DCRPSFVPES VTDFLRQVSL IRHIPDKLAQ IDDYISRLDD EMRKIEAFKR 60 ELPLSVLLVK DAIGTLREES MQYRKSRKEP VLEEFIPLKK SLDEDTKAEI TAKDKDSREK 120 MSWMSSVQLW NSESHCEKTD EVNNKQPSKS ELKVDTRKSL EEEGHSSITE DPFRSYKTMN 180 VGKAFSPFKG FSVAAVRKDN KDELAGVTGL SLHTPGIAKL REDTVTSGLN SKHNGSRGGL 240 SSAAGCQSNI RTGSLAQQQS ARKQRRCWSP ELHRRFVDAL QQLGGSQVAT PKQIRELMQV 300 DGLTNDEVKS HLQKYRLHTR RVPNSQTQPA NKSGVALGNL WMSQGQYVES SKRSSSQSGS 360 PPGPLHLAVS CGGTSTTVGD SMEEEDDVKS ENHSWKNHVH TSGKIDV

Sequence ? help Back to Top

Protein Sequence Length: 407 aa Download sequence

MGSIPPELSL DCRPSFVPES VTDFLRQVSL IRHIPDKLAQ IDDYISRLDD EMRKIEAFKR  60
ELPLSVLLVK DAIGTLREES MQYRKSRKEP VLEEFIPLKK SLDEDTKAEI TAKDKDSREK  120
MSWMSSVQLW NSESHCEKTD EVNNKQPSKS ELKVDTRKSL EEEGHSSITE DPFRSYKTMN  180
VGKAFSPFKG FSVAAVRKDN KDELAGVTGL SLHTPGIAKL REDTVTSGLN SKHNGSRGGL  240
SSAAGCQSNI RTGSLAQQQS ARKQRRCWSP ELHRRFVDAL QQLGGSQVAT PKQIRELMQV  300
DGLTNDEVKS HLQKYRLHTR RVPNSQTQPA NKSGVALGNL WMSQGQYVES SKRSSSQSGS  360
PPGPLHLAVS CGGTSTTVGD SMEEEDDVKS ENHSWKNHVH TSGKIDV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G03500.1	2e-53	G2-like family protein