PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT41798.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family bHLH
Protein Properties Length: 322aa    MW: 35773.3 Da    PI: 6.2456
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT41798.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH39.51e-12100145554
                 HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH   5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                 h   Er RR+r+++ fee+++llP++    ++K++K++i+ ++v+YI +L
  PHT41798.1 100 HIRTERERRKRMRNMFEEIQTLLPHL----QPKVDKSSIVDETVRYIIML 145
                 7889*********************9....79***************887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 322 aa     Download sequence    
MNEGGENDCL IWENDEVWSF LNSDNGQLVS SGVEFVGDKL PDPNRSNTCQ ALTAVKEVGE  60
ASLGGKKRCR SNEKKGTNES CEPKSGANGD GDRESGHELH IRTERERRKR MRNMFEEIQT  120
LLPHLQPKVD KSSIVDETVR YIIMLENTVN NLKEQKLERI QLGIARLSTM NNPVMTPQKL  180
RVGTSWEQFL ADKGSASNSA AITPKNNNNV TGIPLLNTNV PTDFETWSSD NVVLNVCGEE  240
AHISVCCPKK PGLFTFICHV LEKNKIDIVH AHVSSDQFRN LFMIQTHARG ASGLEQLISG  300
ALSVEDMYKQ AAHEIMSGIN PK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49770.15e-33bHLH family protein