PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT41792.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family bHLH
Protein Properties Length: 322aa    MW: 35923.5 Da    PI: 6.6002
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT41792.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH42.51.1e-13100146555
                 HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 h   Er RR+r+++ fe L++llP++    + K +K++i+ ++v+YIk+L+
  PHT41792.1 100 HIRTERERRKRMRNMFEDLQTLLPHL----QSKADKSSIVDETVRYIKMLE 146
                 7889*********************9....79****************996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 322 aa     Download sequence    
MNEGGENDCL IWENNELWSF LNSDNGQLVG SGVEFVGDKL LDPNRSNTCQ SLTTVKEVGE  60
ASLGGQKRCR SNEKKGTNES GEPKSGANGD GSRESGHELH IRTERERRKR MRNMFEDLQT  120
LLPHLQSKAD KSSIVDETVR YIKMLENTVD NLKEQKLERI QLGMARLSTM NNPVMTPQKL  180
RVRTSWEQFL ADKGSASNSA AITPKNNNNV TGIPLLNTNV PTVFETWSSD NVVLNVCGEE  240
AHISVCCPKK PGLFTFICHV LEKNKIDIVH AHVSSDQFRN LFMIQTHARG ASDLEQLISG  300
ALSVEDMYKQ VVHEIMSGIN PK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49770.19e-38bHLH family protein