PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHT41237.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | M-type_MADS | ||||||||
Protein Properties | Length: 141aa MW: 15589.5 Da PI: 10.7225 | ||||||||
Description | M-type_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 35.3 | 1.5e-11 | 12 | 37 | 2 | 27 |
---SHHHHHHHHHHHHHHHHHHHHHH CS SRF-TF 2 rienksnrqvtfskRrngilKKAeEL 27 +i ++ r vtfskRr+g++KKA+EL PHT41237.1 12 KITKETSRMVTFSKRRKGLFKKAKEL 37 588899*******************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 141 aa Download sequence |
MGTGKKKIEI QKITKETSRM VTFSKRRKGL FKKAKELESM TEAFSGTNNN NSRSTEPSTS 60 GLNSRHSNSD DVAVASGDSS GSRSSSSSTP RRKGLHDWVE GIDVERCGNL NRLLMWKKQL 120 EGTRKKIASI EDSESFQALF G |