PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT40655.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family LBD
Protein Properties Length: 409aa    MW: 45629.2 Da    PI: 8.3585
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT40655.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260121.83.6e-3844141198
      DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallk 98 
                 aCaaCk++rr+Ca+dC+lapyfpa+++k+f n+hklFG+sn+lk+lk++++ ++++am++l++eA++ra dPv G++++il+l++q++  +ael+ + 
  PHT40655.1  44 ACAACKYQRRRCAPDCPLAPYFPAKRQKDFLNAHKLFGVSNILKVLKNVSPFQKDNAMKALIFEANIRAGDPVGGCYRTILNLHRQINLCQAELQFVY 141
                 7********************************************************************************************99875 PP

Sequence ? help Back to Top
Protein Sequence    Length: 409 aa     Download sequence    
MTNVVNNNTQ NISYLPSSLT TRSSTAAARV ASQGGGSGGN GSQACAACKY QRRRCAPDCP  60
LAPYFPAKRQ KDFLNAHKLF GVSNILKVLK NVSPFQKDNA MKALIFEANI RAGDPVGGCY  120
RTILNLHRQI NLCQAELQFV YREIFRVKAA AIQVQPNINT KACSLNEINN SILSFDFSPI  180
PCLHEFDIST SIGEGSNSQI VEGERLEGFN NEKFVAKTVM SICNDKQSIV EHGDFKPYFG  240
NFHDYKGKGI ATELRSCLLD LEYKKILSSH LEIMLKWYLL RLEYIFDLMA ERGATRAFST  300
EATRVGQYMK MGPPDFMGVK VDEDPHGFLN KLEKIFQCVY GMIILSYSSL IFIVVSSESD  360
DRLRGKMPPH RACRNNEQPQ PVDPLSEHVS HAKFQEACQA LAQAVTVNA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G13850.11e-34LBD family protein