PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT40582.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

NAC

Protein Properties

Length: 1548aa MW: 170370 Da PI: 5.9274

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT40582.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	38.1	4.7e-12	2	98	35	128
NAM 35 kevdiykv.ePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfy....kgrapkgektdWvmheyrl 128 +evd+y ePw++ + +++ y ++ +kk+a + r++r++ +g W+ + k k+v++++g+l+g k+L + ++++ k+ +W+m ey+l PHT40582.1 2 QEVDLYGDkEPWQIF-E-GDHTNTHYCITQLKKKKADSIRTERSVGKGKWNPQSKAKQVFDHNGRLMGYVKSLKYIprtaHKSSIKAAYGEWLMTEYSL 98 7889886449**5.2.234456799999999999************************************765445555667889****97 PP

Sequence ? help Back to Top
Protein Sequence Length: 1548 aa Download sequence
MQEVDLYGDK EPWQIFEGDH TNTHYCITQL KKKKADSIRT ERSVGKGKWN PQSKAKQVFD 60 HNGRLMGYVK SLKYIPRTAH KSSIKAAYGE WLMTEYSLRY SYLNDIKKKG YVICKIKKKK 120 KKKNDSDKQK GVANDDQNMS DIEEYIDSIL KEENNENIEY TEGEEVGEHF LATLGCHDDL 180 PANNRHELAL AGGSGPLRGQ GALACFQGFL HYAAEGKEGR WDKSRANCGK GDMESTGHRE 240 GGGNENLWFR FGVFLTFSEL EERRMGFAYC VWQPNGLHCG EALNYKILDR KSGSCVGLDY 300 KLLGNARVLC KKSSTGKRLK RIGGCSDYSL AYSRRIQLSC ALWKSDSSGN LAGVKGSRGV 360 KLLRCQGNDS LAFIDGNGRN VESSESAEDG GSLTASTNGI AEISSATELE EDKGEEKEGP 420 QLDELRELLQ KALKDLEVAQ MNSTMFEEKA QTISEAAIAL KDEAAHAWDD VNKQLDSIQE 480 IVGEEMIAKE AVQKATMALS LAEARLLVAL DSIQAAKQVS IPSKTSEESK GQELASLMEE 540 EAALSAVQED IEECRDHLEN CEAILRRVQN KKEELQKEVD RLNDLAEQAQ INSLKAEEDV 600 SNIMLLAEQA VAYELEATQR VSDAEIALQK AEKNLAASPV DNAETSAMQN GSSTLSQVSV 660 DGILSEDEVF PRSSVDSVIE KDREVQLEDA WVVSGPLSDA SDDEDRKLVL DSSKDFDSDA 720 ENPKSVQTVR QEANKESAKD SSSLNAPKAL LKKSSRFLPA SFFSSSDGEE FTPASVFQSL 780 LESARNQLPK LVVGSLLMGA GIAFYANRSE RIFQLFQQPD IITTSIDEIN EEEASLFDML 840 WLLLASVIFV PIFQKIPGGS PVLGYLAAGI LIGPYGLSII RHVHGTKAIA EFGVVFLLFN 900 IGLELSVERL SSMKKYVFGL GTAQVLVTAV VVGLVANLVA GQAGPAAIVI GNGLALSSTA 960 VVLQVLQERG ESTSRHGRAT FSVLLFQDLA VVVLLILIPL ISPNSSKGGV GFRAIAEALG 1020 LAAVKAIVAI TAIIAGGRLL LRPIYKQIAE NQNAEIFSAN TLLVILGTSL LTARAGLSMA 1080 LGAFLAGLLL AETEFSLQVE SDIAPYRGLL LGLFFMTVGM SIDPKLLLSN FSVIMGSLGL 1140 LLGGKTILVA LVGKLFGISI VSAIRVGLLL APGGEFAFVA FGEAVNQGIM SSELSSLLFL 1200 VVGISMALTP YLAAGGQLIA SRFELQDVRS LLPVESEVLV PTFGGTIFLL LLLARMKLMG 1260 RAGHHRGDWW WNEEVEKKVG TKKGAYAMLV ESKDEEEKRV NRKEYKLARK EAKSAVTAAK 1320 TAAFESLYAG LQGKGGEKKL FRLAKARERK GRDLDQVRCI KGEDGRVLVE DGHIKDRWQS 1380 YFHRLLNDEG DRVIVLGELE HSEECRDFSY CRRFKVEEVS EAVRRMRRGR ATGPDEISVE 1440 FWKFVGETGV RWLTGLFNEI FKTAKMPEAW RWSTMIPLYK NKGDIQSCNN YRGIKLLSHS 1500 MKIWERVVEV RLRRIVSISE NQFGFMPGRS TTEAIHLVRR LVEQYRER

Sequence ? help Back to Top

Protein Sequence Length: 1548 aa Download sequence

MQEVDLYGDK EPWQIFEGDH TNTHYCITQL KKKKADSIRT ERSVGKGKWN PQSKAKQVFD  60
HNGRLMGYVK SLKYIPRTAH KSSIKAAYGE WLMTEYSLRY SYLNDIKKKG YVICKIKKKK  120
KKKNDSDKQK GVANDDQNMS DIEEYIDSIL KEENNENIEY TEGEEVGEHF LATLGCHDDL  180
PANNRHELAL AGGSGPLRGQ GALACFQGFL HYAAEGKEGR WDKSRANCGK GDMESTGHRE  240
GGGNENLWFR FGVFLTFSEL EERRMGFAYC VWQPNGLHCG EALNYKILDR KSGSCVGLDY  300
KLLGNARVLC KKSSTGKRLK RIGGCSDYSL AYSRRIQLSC ALWKSDSSGN LAGVKGSRGV  360
KLLRCQGNDS LAFIDGNGRN VESSESAEDG GSLTASTNGI AEISSATELE EDKGEEKEGP  420
QLDELRELLQ KALKDLEVAQ MNSTMFEEKA QTISEAAIAL KDEAAHAWDD VNKQLDSIQE  480
IVGEEMIAKE AVQKATMALS LAEARLLVAL DSIQAAKQVS IPSKTSEESK GQELASLMEE  540
EAALSAVQED IEECRDHLEN CEAILRRVQN KKEELQKEVD RLNDLAEQAQ INSLKAEEDV  600
SNIMLLAEQA VAYELEATQR VSDAEIALQK AEKNLAASPV DNAETSAMQN GSSTLSQVSV  660
DGILSEDEVF PRSSVDSVIE KDREVQLEDA WVVSGPLSDA SDDEDRKLVL DSSKDFDSDA  720
ENPKSVQTVR QEANKESAKD SSSLNAPKAL LKKSSRFLPA SFFSSSDGEE FTPASVFQSL  780
LESARNQLPK LVVGSLLMGA GIAFYANRSE RIFQLFQQPD IITTSIDEIN EEEASLFDML  840
WLLLASVIFV PIFQKIPGGS PVLGYLAAGI LIGPYGLSII RHVHGTKAIA EFGVVFLLFN  900
IGLELSVERL SSMKKYVFGL GTAQVLVTAV VVGLVANLVA GQAGPAAIVI GNGLALSSTA  960
VVLQVLQERG ESTSRHGRAT FSVLLFQDLA VVVLLILIPL ISPNSSKGGV GFRAIAEALG  1020
LAAVKAIVAI TAIIAGGRLL LRPIYKQIAE NQNAEIFSAN TLLVILGTSL LTARAGLSMA  1080
LGAFLAGLLL AETEFSLQVE SDIAPYRGLL LGLFFMTVGM SIDPKLLLSN FSVIMGSLGL  1140
LLGGKTILVA LVGKLFGISI VSAIRVGLLL APGGEFAFVA FGEAVNQGIM SSELSSLLFL  1200
VVGISMALTP YLAAGGQLIA SRFELQDVRS LLPVESEVLV PTFGGTIFLL LLLARMKLMG  1260
RAGHHRGDWW WNEEVEKKVG TKKGAYAMLV ESKDEEEKRV NRKEYKLARK EAKSAVTAAK  1320
TAAFESLYAG LQGKGGEKKL FRLAKARERK GRDLDQVRCI KGEDGRVLVE DGHIKDRWQS  1380
YFHRLLNDEG DRVIVLGELE HSEECRDFSY CRRFKVEEVS EAVRRMRRGR ATGPDEISVE  1440
FWKFVGETGV RWLTGLFNEI FKTAKMPEAW RWSTMIPLYK NKGDIQSCNN YRGIKLLSHS  1500
MKIWERVVEV RLRRIVSISE NQFGFMPGRS TTEAIHLVRR LVEQYRER

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	107	123	KKKGYVICKIKKKKKKK
2	117	123	KKKKKKK