PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHT40562.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | NAC | ||||||||
Protein Properties | Length: 180aa MW: 20704.5 Da PI: 8.0655 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 45.4 | 2.5e-14 | 2 | 98 | 35 | 128 |
NAM 35 kevdiykv.ePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfy....kgrapkgektdWvmheyrl 128 +evd+y ePw++ + +++ y ++ +kk+a + r++r++ +g W+ + k k+v++++g+l+g+ k+L + ++++ k+ +W+m ey+l PHT40562.1 2 QEVDLYGDkEPWQIF-E-GDNTNTHYCITQLKKKKADSIRTERSVGKGKWNPQSKAKQVFDHNGRLMGCVKSLKYIprtaHKSSIKAAYGEWLMTEYSL 98 7889886449****5.2.234456799999999999****************************************765445555667889******97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 180 aa Download sequence |
MQEVDLYGDK EPWQIFEGDN TNTHYCITQL KKKKADSIRT ERSVGKGKWN PQSKAKQVFD 60 HNGRLMGCVK SLKYIPRTAH KSSIKAAYGE WLMTEYSLRY SYLNDIKKKG YVICKIKKKK 120 ENDSDKHKGV ANDDQNMSDI EEYIDSILKE EDLNHDLAVN SKHELALAGS IDLDAIDFVL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G18270.1 | 1e-06 | NAC family protein |