PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHT39991.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | G2-like | ||||||||
Protein Properties | Length: 412aa MW: 45079.3 Da PI: 6.2767 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 102 | 3.8e-32 | 229 | 283 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kpr+rWtpeLHe Fveav++LGGsekAtPk +l++m+v+gLt++hvkSH QkYR+ PHT39991.1 229 KPRMRWTPELHEVFVEAVSKLGGSEKATPKGVLKIMNVEGLTIYHVKSHSQKYRT 283 79****************************************************8 PP | |||||||
2 | Myb_DNA-binding | 50 | 7e-16 | 231 | 282 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT+e++e +v+av +lGg t+k + + m+ +g+t +++ks+ qky+ PHT39991.1 231 RMRWTPELHEVFVEAVSKLGGSekaTPKGVLKIMNvEGLTIYHVKSHSQKYR 282 89******************99****************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 412 aa Download sequence |
MNMRCALCIQ RSSEVQHSNM GVSGATSTSS NLIPSQAIPL ASKSRTVGHL LSLTSGPHKD 60 FKFCSTSSQE SRQHNYPFIS SEASAATCRS SLSSIHSTSF DNCPIGNDSN SSGKDAYHDL 120 INFPTNDPIQ NGQVESLAVV MPSNNQAKRS DWQEWADQLI NDDDDGGLGS SWNDILVDIS 180 PPEIKFLETS EVLACESHIL PSPAAVVAAA SSGQSYPVGS PSSTTALTKP RMRWTPELHE 240 VFVEAVSKLG GSEKATPKGV LKIMNVEGLT IYHVKSHSQK YRTARYKPGS SEGTSEKKST 300 SVIEMPSLDL KTTMGITEAL RLQMEVQKQL HEQLEIQRKL QLRIEEQGKY LEMMFERTKD 360 IGQDFKVSSS ITDEHPSPST EPKHSPPNDK SKALEKDHVS LNDRSITGQE SS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G28610.1 | 2e-75 | G2-like family protein |