PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT39896.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 308aa    MW: 34110.1 Da    PI: 8.9178
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT39896.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP264.52.1e-204595256
         AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
                ++ GVr+++ +grWvAeI+d s   +r r +lg+++t+eeAa+a+++a+++l+ge
  PHT39896.1 45 KFVGVRQRP-SGRWVAEIKDSS---QRVRLWLGTYDTPEEAARAYDEAARALRGE 95
                799******.7*********43...36**************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 308 aa     Download sequence    
MAPGSETTTT TTITSTTTNT NTNTNTSTTK SSSSSTQISK SITRKFVGVR QRPSGRWVAE  60
IKDSSQRVRL WLGTYDTPEE AARAYDEAAR ALRGENARTN FAPSAPNNPN TNDQSNVLQS  120
YHDTKHGLSF SSIKAKLSKN LQSIMARNSE NKSSSKSRVS DHFTFARIFH SKNSYDHQYQ  180
NHHHVDMKKI EKVVQPSIRV LPHHVTDNEN NNINDSYTSW ENSSVSDCSS EWTAFRQLGL  240
ESDNGSDGSE FFLGSDPMAG WISSPDIMSS SSTTEGSRSK RFKVSSSVMV PPTFSESPLH  300
GDNYVGFN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.12e-18ERF family protein