PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT39892.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

G2-like

Protein Properties

Length: 398aa MW: 44492.6 Da PI: 4.7048

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT39892.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	32.2	2.4e-10	182	212	25	55
G2-like 25 ekAtPktilelmkvkgLtlehvkSHLQkYRl 55 ++A+Pk+i+e+m+ +gLt+ehv+ HLQ + + PHT39892.1 182 KEAVPKKIVEIMNEPGLTREHVARHLQPFQT 212 68*************************9865 PP

Sequence ? help Back to Top
Protein Sequence Length: 398 aa Download sequence
MDILGVGPNS SDMGTKNICI LLVLDDFTIH HIVSDMLDNQ TYQVLHVGKT MDTLNVIWER 60 KSIFNLVLTN IHRLHTNGVD ILQIIKNKLN LPTILMSPGD AKYENQVQDC SVAAYVVSFS 120 DTDEMNKFWQ KVLEKEKGRK AAEENNDDEN ASRMPQNVTA DTSRDNTSSA DTDTAIHARD 180 TKEAVPKKIV EIMNEPGLTR EHVARHLQPF QTYFQQGTGG MNGLLDFANS READHNALIG 240 QHSAFVPRIA HGSNFRVYGD KRKNMLFSIQ SGNANQPTNS NSGLEFSGFR LSTDGKSVNF 300 GQKENKVSCQ IPEMPDNFIP QEQLSAQRSS GDLEEYSATL FGNEVYVPPI DNYDSIEQQY 360 SATELPQVML GVNSLGTEID IKSLLETTED RSSQLIWE

Sequence ? help Back to Top

Protein Sequence Length: 398 aa Download sequence

MDILGVGPNS SDMGTKNICI LLVLDDFTIH HIVSDMLDNQ TYQVLHVGKT MDTLNVIWER  60
KSIFNLVLTN IHRLHTNGVD ILQIIKNKLN LPTILMSPGD AKYENQVQDC SVAAYVVSFS  120
DTDEMNKFWQ KVLEKEKGRK AAEENNDDEN ASRMPQNVTA DTSRDNTSSA DTDTAIHARD  180
TKEAVPKKIV EIMNEPGLTR EHVARHLQPF QTYFQQGTGG MNGLLDFANS READHNALIG  240
QHSAFVPRIA HGSNFRVYGD KRKNMLFSIQ SGNANQPTNS NSGLEFSGFR LSTDGKSVNF  300
GQKENKVSCQ IPEMPDNFIP QEQLSAQRSS GDLEEYSATL FGNEVYVPPI DNYDSIEQQY  360
SATELPQVML GVNSLGTEID IKSLLETTED RSSQLIWE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G16110.1	2e-20	ARR-B family protein