PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT39490.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family bHLH
Protein Properties Length: 407aa    MW: 44230.9 Da    PI: 7.8873
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT39490.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH14.75.6e-052953331255
                 HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH  12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 R +++ ++++ L++l+ +      +K + a++L +A+ YIk Lq
  PHT39490.1 295 RKEKLGDRIAALQQLVAPF-----GKTDTASVLMEAIGYIKFLQ 333
                 7788899*********998.....8******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 407 aa     Download sequence    
MEPANLHHHQ QHQQYHHQLQ FQDQFPLIGI SPNSSSSSNN SCYGVSTTTH TWTPCTTTIL  60
NSPGSGLINS YSSGAIINTT NSSSSDPLNL VSMSSTTQDL GFHQWDDNIK QESSLDNSYP  120
RFTQMLKSPS SIEEARELSD MNAKLLLGTL SNSGLQLYHG DNNNNNLLYS SNSSSGATNR  180
GRFSQIYPTI NVSNLNMYQA NSCSSLDMNL QPLDLINSSR YGGSFSQTYG LTNPFQHSSS  240
ESPVNSSTST ISAFSNGMPE AKRTSNTLEP NKGPQNAPKK SRVDSRTSCP PFKVRKEKLG  300
DRIAALQQLV APFGKTDTAS VLMEAIGYIK FLQNQVETLS VPYMKSSRGK TNRSLHGGGG  360
EMNNGSSEEI KRDLRSRGLC LVPLSCLTYV TDGGGGIWPP PNFTGGT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G27660.12e-59bHLH family protein