PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT39447.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family bHLH
Protein Properties Length: 367aa    MW: 38827.6 Da    PI: 8.2579
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT39447.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH33.48.1e-11300345655
                 HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 +++Er RR ri  ++ +L++l+P+     +k  s a++L +Av++I+ Lq
  PHT39447.1 300 SIAERERRTRISGKLKKLQDLVPNM----DKQTSYADMLDLAVQHIRTLQ 345
                 689*********************7....688*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 367 aa     Download sequence    
MYPSSTSSSS SMSHGSSSTA AAGGAAGAGG LTRYGSAPGS FLTTAVESVV NGGNHEYTSA  60
AHGSHQSHHH HSHLGTTPSQ YFPSKAPKEQ QSTNLQRSIG FNDLTIGGGG GGGGNSTGVM  120
PTAAASSTTP LVRHSSSPAR FLNQLAAAAG DTGFSMGRGS YNTKGVGDSG RGITRLNSQL  180
SFTRQEGLSQ IAEENEDIEG TSTDNGHRKS THSYATASSF SMGSWEDNNS IMFSVTPSKR  240
AKHISNDIVN GLDDGETQFQ FGLSQTALEM ASMDRLLHIP EDSVPCKIRA KRGCATHPRS  300
IAERERRTRI SGKLKKLQDL VPNMDKQTSY ADMLDLAVQH IRTLQDQVQN LNTELENCKC  360
GCKKSSQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G05805.11e-74bHLH family protein