PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT39246.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

G2-like

Protein Properties

Length: 292aa MW: 32177.5 Da PI: 6.2543

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT39246.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	109.3	2e-34	45	99	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kprlrWt+eLHerFv+av+qLGG++kAtPkti+++m+vkgLtl+h+kSHLQkYR+ PHT39246.1 45 KPRLRWTTELHERFVDAVTQLGGPDKATPKTIMRTMGVKGLTLYHLKSHLQKYRM 99 79****************************************************7 PP
2	Myb_DNA-binding	79.1	5.5e-25	47	98	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWTte++e++vdav+qlGg+ t+ktI+rtmg kg+tl+++ks++qky+ PHT39246.1 47 RLRWTTELHERFVDAVTQLGGPdkaTPKTIMRTMGvKGLTLYHLKSHLQKYR 98 89*************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 292 aa Download sequence
MYSTLPIRNL GIEESGDFFN LQGCLSVDGT NLPGDSCVVL STDPKPRLRW TTELHERFVD 60 AVTQLGGPDK ATPKTIMRTM GVKGLTLYHL KSHLQKYRMG KQSAKEGTEN SKDVSCPAES 120 QDTGSSTSGS SRVIAQDINE GLQVTEALRV QMEVQRRLHE QLEVQRRLQF RIEAQGKYLQ 180 SILEKACKAF NSQSLESNGL EMNGEDLPAL ATKVANDCEG IITVPSLPEI GSSIENRNAC 240 HLPARLGDCM LDDCLPSNGI GALKKRPRAF THANGLPMES NTREVEWMMS NI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G24120.1	1e-109	G2-like family protein