PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT39004.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family bHLH
Protein Properties Length: 225aa    MW: 25944.4 Da    PI: 4.9713
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT39004.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH314.7e-1075122454
                 HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                 ++  rEr RR+++N++f+eL ++l +    +  K +K++iL  A++ +++L
  PHT39004.1  75 NKACRERLRREKLNERFSELCSVLEPG---KPVKTDKMAILGDAIRVLNQL 122
                 6789**********************9...99****************999 PP
Sequence ? help Back to Top
Protein Sequence    Length: 225 aa     Download sequence    
MDQFDSFRDD NWDLIDINNF IDDVPSDFFW NDQTQNLRTV AELEAPLSGA AFQECLETEC  60
PRKRGRNESC SKQGNKACRE RLRREKLNER FSELCSVLEP GKPVKTDKMA ILGDAIRVLN  120
QLKTESEEYK EMNQKLMEEI KMLKAEKNEL REEKLALKAD KERMEQELKA TAAPASFIPP  180
HPAAYQPAVN KMAVFPSYGY VPMWQYLPPS SRDTSQDHQL RPPAA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G14410.23e-67bHLH family protein