PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT38247.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 371aa    MW: 42448.7 Da    PI: 4.2063
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT38247.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.31.1e-191371256
         AP2  2 gykGVrwdkkrgrWvAeIrdpse.ng...kr.krfslgkfgtaeeAakaaiaarkklege 56
                 y+GVr++  +g+WvAeIr+p++  +    + kr +lg+f t  eAa+ +++a+k+++g+
  PHT38247.1 13 TYRGVRQRT-WGKWVAEIREPVNnTNehqSNgKRLWLGTFSTDAEAARTYDEAAKAMYGH 71
                69****999.**********777444695449*************************996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 371 aa     Download sequence    
MRGKGRPENL ECTYRGVRQR TWGKWVAEIR EPVNNTNEHQ SNGKRLWLGT FSTDAEAART  60
YDEAAKAMYG HDATLNFPEY CVQNAQLAND LLHVPIAQTT SLESSESSVE DAIVESDLQT  120
DEKIFVDDRC VVERNLCLVE KHGSSDCCLN TKSVVLQVYH SIDAIKGFNC SSTIDLEPIQ  180
EPTSSYVKVE TPPKNDFMQH RDLERLDAVN EGSNNLCILH QENTEVKSNY SMYHKDVLRP  240
NESYDFVDQV LLPCPATTPQ DYDCSANTLQ EQPLDFRLNA DMRSNMGFME RLLMEDNNTT  300
EATNILNTFC LNENIDESYQ FQSFLDELSD VNNLKNEEQF DYYNYNQQID LPNYQTNAAV  360
HSDGFISKED E
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75490.12e-29ERF family protein