PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT37909.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

G2-like

Protein Properties

Length: 443aa MW: 49995.8 Da PI: 8.5405

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT37909.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	60.1	4.5e-19	198	248	4	55
G2-like 4 lrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 ++Wt+ LH +F++av+qL G+ + Pk+ile+m+v+ Lt+ +v+SHLQk R+ PHT37909.1 198 IEWTEYLHGKFMKAVRQL-GEGNCYPKNILEVMGVPNLTRMQVASHLQKCRT 248 68**************.9***************************997 PP
2	Myb_DNA-binding	29.5	1.8e-09	200	246	4	47
S-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHH CS Myb_DNA-binding 4 WTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqky 47 WT+ ++ ++ +av+qlG g +k I + mg ++t+ q+ s++qk PHT37909.1 200 WTEYLHGKFMKAVRQLGEGncYPKNILEVMGvPNLTRMQVASHLQKC 246 *****************999*********************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 443 aa Download sequence
MTASYYGMIE EVRVMLIDSD TTSATEMVDL LKCYEYKVTM IGTTSAAMTM LSKGKEKIDV 60 MIINVHSLNL FSFEHLAQAV NLDIISLVIS DEHDELFAKK AWDNGAYLYI KKPFDGGILK 120 YLWQFVLREK MQREKVGECP MHVEDIGNNI IHEAENDVGS NGKDKLKRKR GRKNVIETNV 180 GERQRSNVNK AVRQKLCIEW TEYLHGKFMK AVRQLGEGNC YPKNILEVMG VPNLTRMQVA 240 SHLQKCRTNN WRAPRERKSV PDSSGQGSSS GAQKPSFFTK FETMPRLHTC VSNLQRNPNQ 300 VHRDPEFLLP TLSTSNIFSR GESSIPKLYH PQFQVQPHHL TFGNSFNNPF FPVQNNIGGG 360 IQQYGPFFGM PGSQGLQGPI IGNINYTPNL EFNHGSHQAQ SIYSLDLNKM ANHNLGPPSA 420 TLPNEQGRGF DQVYFDDLVS AST

Sequence ? help Back to Top

Protein Sequence Length: 443 aa Download sequence

MTASYYGMIE EVRVMLIDSD TTSATEMVDL LKCYEYKVTM IGTTSAAMTM LSKGKEKIDV  60
MIINVHSLNL FSFEHLAQAV NLDIISLVIS DEHDELFAKK AWDNGAYLYI KKPFDGGILK  120
YLWQFVLREK MQREKVGECP MHVEDIGNNI IHEAENDVGS NGKDKLKRKR GRKNVIETNV  180
GERQRSNVNK AVRQKLCIEW TEYLHGKFMK AVRQLGEGNC YPKNILEVMG VPNLTRMQVA  240
SHLQKCRTNN WRAPRERKSV PDSSGQGSSS GAQKPSFFTK FETMPRLHTC VSNLQRNPNQ  300
VHRDPEFLLP TLSTSNIFSR GESSIPKLYH PQFQVQPHHL TFGNSFNNPF FPVQNNIGGG  360
IQQYGPFFGM PGSQGLQGPI IGNINYTPNL EFNHGSHQAQ SIYSLDLNKM ANHNLGPPSA  420
TLPNEQGRGF DQVYFDDLVS AST

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	164	170	DKLKRKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G16110.1	3e-25	ARR-B family protein