PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT37714.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

G2-like

Protein Properties

Length: 335aa MW: 37441.3 Da PI: 7.3411

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT37714.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	64.6	1.8e-20	53	102	5	55
G2-like 5 rWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 Wt +LH++F+ea++qL G+ + Pk+ile+m+v gLt++++ SHLQk R+ PHT37714.1 53 IWTDDLHAKFMEAIHQL-GEGRCYPKEILEVMNVAGLTRTQISSHLQKCRS 102 6**************.9***************************996 PP
2	Myb_DNA-binding	33.1	1.3e-10	54	100	4	47
S-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHH CS Myb_DNA-binding 4 WTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqky 47 WT +++ ++ +a++qlG g +k I + m+ g+t+ q+ s++qk PHT37714.1 54 WTDDLHAKFMEAIHQLGEGrcYPKEILEVMNvAGLTRTQISSHLQKC 100 *********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 335 aa Download sequence
MNVDYIFNNN IAGDNEEPNR EKKRGRKSSK EIQEEIHQTS VINQAVRRQT CTIWTDDLHA 60 KFMEAIHQLG EGRCYPKEIL EVMNVAGLTR TQISSHLQKC RSNSWRAPRK QKAICHSLSQ 120 ASSSGTRQKN SFKNYGAMPR LPNLQCNLDQ MERGSEFSFS APNINNIFAR GKSLTQQQLY 180 HPQPQVQPQA QNNVGGGLQQ HGPSFGLLGS QGLQDPTIGN IIYKPGLTFN NSNHYTQSDY 240 SLNLNAAHDT TYSGSRIMSD TNIDATINYY NLNVNLDNVT TYSRSAMISN TGVANATINE 300 LGAANANFQQ NIGESNEHDN ELFQVHFDDQ VNASL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G44190.1	5e-13	G2-like family protein