PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT37690.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

G2-like

Protein Properties

Length: 535aa MW: 60214.9 Da PI: 6.0857

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT37690.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	55.6	1.2e-17	68	114	4	51
G2-like 4 lrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQ 51 ++Wt LHe+F++av+qL G+ + Pk+ile+m+v+ Lt+ +v+SHLQ PHT37690.1 68 IEWTDYLHEKFMKAVRQL-GEGNCYPKNILEVMGVPNLTRMQVASHLQ 114 68**************.9************************** PP
2	Myb_DNA-binding	30.3	9.4e-10	70	114	4	45
S-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHH CS Myb_DNA-binding 4 WTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwq 45 WT ++e++ +av+qlG g +k I + mg ++t+ q+ s++q PHT37690.1 70 WTDYLHEKFMKAVRQLGEGncYPKNILEVMGvPNLTRMQVASHLQ 114 *****************999********************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 535 aa Download sequence
MQREKVGEGP MHVEDIGNNI IHEAENDVGS NGKYKLKRKR GRKNLIETNV GESQRSNVNK 60 AVRQKICIEW TDYLHEKFMK AVRQLGEGNC YPKNILEVMG VPNLTRMQVA SHLQVQPHHL 120 TFGNSFNNPF FPVQNNIGGG IHQYGPFFGM PGSQGLQGPI IGNINSMPNL EFNRGSHHTQ 180 SIYSLDLNNM ANHNHGPPSA TLPNEQGRGF DQVYFDDLSL SNNPMKIGVE SQGVNAIYFK 240 PMDTQVTVRS ILPHDHDWVR LSAIVANMTA FVDHGFALMI IFTDRDHGLS SNHGLVEWEE 300 FATTFLDRTS MLIKEMELSK IMVHAQKIEE EKYKEREREN KSAITGRATN PDDEDLGDEE 360 LLNPRRIDEV ATPGNRRDHQ ARFRPECRAV QIPFEDDDDD LDGAGATGAI IPPPLAPEAK 420 CNITSTMIQL LQLKGLFGGL TGDDPNMHLI NFISICKSFD NPGVGQNAIR LCLFPLSLFG 480 EATLWLNGLT PDSITNWRQL KDAFIERFYP PSKRAQLRDE ISNFRQLPTE ALHET

Sequence ? help Back to Top

Protein Sequence Length: 535 aa Download sequence

MQREKVGEGP MHVEDIGNNI IHEAENDVGS NGKYKLKRKR GRKNLIETNV GESQRSNVNK  60
AVRQKICIEW TDYLHEKFMK AVRQLGEGNC YPKNILEVMG VPNLTRMQVA SHLQVQPHHL  120
TFGNSFNNPF FPVQNNIGGG IHQYGPFFGM PGSQGLQGPI IGNINSMPNL EFNRGSHHTQ  180
SIYSLDLNNM ANHNHGPPSA TLPNEQGRGF DQVYFDDLSL SNNPMKIGVE SQGVNAIYFK  240
PMDTQVTVRS ILPHDHDWVR LSAIVANMTA FVDHGFALMI IFTDRDHGLS SNHGLVEWEE  300
FATTFLDRTS MLIKEMELSK IMVHAQKIEE EKYKEREREN KSAITGRATN PDDEDLGDEE  360
LLNPRRIDEV ATPGNRRDHQ ARFRPECRAV QIPFEDDDDD LDGAGATGAI IPPPLAPEAK  420
CNITSTMIQL LQLKGLFGGL TGDDPNMHLI NFISICKSFD NPGVGQNAIR LCLFPLSLFG  480
EATLWLNGLT PDSITNWRQL KDAFIERFYP PSKRAQLRDE ISNFRQLPTE ALHET

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G20570.1	9e-11	G2-like family protein