PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT37506.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

Protein Properties

Length: 369aa MW: 41876.8 Da PI: 6.6142

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT37506.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	108.1	4.1e-34	90	203	1	99
EEEE-..-HHHHTT-EE--HHH.HTT...............---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh...............ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkl 84 f+k ltpsdv+k++rlv+pk++ae++ ++++e++ l++edesg+sW+++++y+++s++yvltkGW++Fvk+++L++gD+v+F++ PHT37506.1 90 FEKPLTPSDVGKLNRLVIPKQHAEKYfplsgnnnnsnnnnnDSSTEKGLLLSFEDESGKSWRFRYSYWNSSQSYVLTKGWSRFVKEKRLDAGDIVMFER 188 99***************************999999999877778999*********************************************9 PP -SSSEE..EEEEE-S CS B3 85 dgrsefelvvkvfrk 99 ++++ +l+++++r+ PHT37506.1 189 HRSDADRLFIGWRRR 203 8889999****98 PP

Sequence ? help Back to Top
Protein Sequence Length: 369 aa Download sequence
MSINHISSEL PETVWWTKQQ QQYIIDSSTN KSSSSLWPPP SQFYPPQTNT MFAFNLNNNS 60 TSTINDEDEE QEQEKEQNLE HQEIPKEHLF EKPLTPSDVG KLNRLVIPKQ HAEKYFPLSG 120 NNNNSNNNNN DSSTEKGLLL SFEDESGKSW RFRYSYWNSS QSYVLTKGWS RFVKEKRLDA 180 GDIVMFERHR SDADRLFIGW RRRNTAVIPA AAAAQDSCAV AVTPLPPGMV GPGWAQVYYG 240 GHPYPGPGAG LPYQPDCLHA GRRAMQNQTT ASVNNNTRRQ VRLFGVNLEC EVDESSWSEP 300 PPTPDGGGSS TSSHHHGQDQ ASQHYYQYQF QYAKPHVPAA ASSYNNNNHH NHTDMNFSRD 360 VNQMRYHQG

Sequence ? help Back to Top

Protein Sequence Length: 369 aa Download sequence

MSINHISSEL PETVWWTKQQ QQYIIDSSTN KSSSSLWPPP SQFYPPQTNT MFAFNLNNNS  60
TSTINDEDEE QEQEKEQNLE HQEIPKEHLF EKPLTPSDVG KLNRLVIPKQ HAEKYFPLSG  120
NNNNSNNNNN DSSTEKGLLL SFEDESGKSW RFRYSYWNSS QSYVLTKGWS RFVKEKRLDA  180
GDIVMFERHR SDADRLFIGW RRRNTAVIPA AAAAQDSCAV AVTPLPPGMV GPGWAQVYYG  240
GHPYPGPGAG LPYQPDCLHA GRRAMQNQTT ASVNNNTRRQ VRLFGVNLEC EVDESSWSEP  300
PPTPDGGGSS TSSHHHGQDQ ASQHYYQYQF QYAKPHVPAA ASSYNNNNHH NHTDMNFSRD  360
VNQMRYHQG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G06250.2	3e-63	B3 family protein