PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHT37399.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | NAC | ||||||||
Protein Properties | Length: 220aa MW: 24730.9 Da PI: 10.88 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 76.9 | 4.7e-24 | 7 | 84 | 52 | 128 |
NAM 52 kaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128 k+++++w+fF++ + ++a+g r++r t++gyWkatg+ v+s+ +++ +g k+t+vfykgrap+g+kt+W m+ey++ PHT37399.1 7 KHDSEQWFFFIPIQDREARGGRPTRLTTHGYWKATGTPGFVYSSsNNRIIGGKRTMVFYKGRAPNGKKTQWKMNEYKA 84 56778********************99***************9877888***************************86 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 220 aa Download sequence |
MAGEVIKHDS EQWFFFIPIQ DREARGGRPT RLTTHGYWKA TGTPGFVYSS SNNRIIGGKR 60 TMVFYKGRAP NGKKTQWKMN EYKATTDDDG KFEFEPQQSH WEALQTGHIS RARGTKSGGP 120 ALKQRDPVVG AASRVRKATP GNHGKKKSID GQAFSPTCNL EDPIMRGVEY GKGRTTRVTQ 180 PHLTFMRGAN STKWRSENPP NIIEIKHKSK QKNPQNASPY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G44350.1 | 8e-36 | NAC family protein |