PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHT37280.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | SBP | ||||||||
Protein Properties | Length: 367aa MW: 39617.8 Da PI: 8.7976 | ||||||||
Description | SBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SBP | 134.6 | 3.1e-42 | 68 | 143 | 1 | 76 |
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkk 76 +CqvegC+adls+ak y++rhkvC +hsk+p+v+v+gleqrfCqqCsrfh+l efD++krsCrrrLa hnerrrk+ PHT37280.1 68 RCQVEGCQADLSDAKAYYSRHKVCGMHSKSPTVVVAGLEQRFCQQCSRFHQLPEFDQGKRSCRRRLACHNERRRKP 143 6*************************************************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 367 aa Download sequence |
MGTWKKSEME LSSSDSLNSL KFGKKIYFGN VGVGAPAPVT GDGAPATAPV VSKRGRGGGV 60 VQGGQPPRCQ VEGCQADLSD AKAYYSRHKV CGMHSKSPTV VVAGLEQRFC QQCSRFHQLP 120 EFDQGKRSCR RRLACHNERR RKPPSGSLFS THYGNLSSSV FENNSSRSGS FLVDFSSHQN 180 VNESSWPNTR ASEQGWDHPS TASGKFLQRP WLNNSEKAAS ELVLQGSTTR TSYPGVPSGD 240 CFPGVSDSNG ALSLLSNRSW GSRNQPPSLG VNSQINVNGT HVIQPSGSHV APTNHFSSPS 300 LGFKGNEASS SLHELPPDLG LGQMLQASDN PYCGELEIAQ HGDGRRHMEM DHSKGYHPSV 360 QNVHWTL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G42200.1 | 1e-44 | SBP family protein |