PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHT37119.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 216aa MW: 23989.6 Da PI: 8.7231 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 80.2 | 1.4e-25 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 k+ien s r vtfskRr g++KKAeELS+LCdae+ vi+fs+t+kly ++s PHT37119.1 9 KKIENISCRRVTFSKRRSGLFKKAEELSILCDAEIGVIVFSNTDKLYKFAS 59 68***********************************************86 PP | |||||||
2 | K-box | 54.2 | 6.2e-19 | 83 | 160 | 12 | 89 |
K-box 12 akaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqe 89 ++ + e++ Lk+e+ L++ +++G++L+ L +keLqqLe+qL +++ +i++kK+++lle ++++ ++ +el + PHT37119.1 83 VQNVAQSLEVNALKDEVARLRQVTGRMMGKELDGLGFKELQQLEHQLTEGILSIKNKKEQVLLELLQKSNMQIEELGK 160 444556789*******************************************************99999998888765 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 216 aa Download sequence |
MGRGKIEMKK IENISCRRVT FSKRRSGLFK KAEELSILCD AEIGVIVFSN TDKLYKFASS 60 NSSMEKIMDR YTGCPASSDH TSVQNVAQSL EVNALKDEVA RLRQVTGRMM GKELDGLGFK 120 ELQQLEHQLT EGILSIKNKK EQVLLELLQK SNMQIEELGK KSSGGSSTVI CDYKSVREEI 180 SDTSLSLGLS VATSQQKKIP KIECTSNDSG KLMILD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G13790.1 | 9e-38 | MIKC_MADS family protein |