PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT37065.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

G2-like

Protein Properties

Length: 492aa MW: 55178.5 Da PI: 6.6673

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT37065.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	90.4	1.6e-28	215	269	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+r+rWt++LH+rF+e+ ++LGG++kAtPk+il+lm+ ++Ltl++vkSHLQkYR PHT37065.1 215 KTRIRWTEDLHDRFLECANRLGGADKATPKQILNLMDSESLTLDQVKSHLQKYRN 269 68****************************************************6 PP
2	Myb_DNA-binding	40.3	7.1e-13	219	268	3	48
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 rWT++++++++++ ++lGg t+k I + m + +tl q+ks++qky+ PHT37065.1 219 RWTEDLHDRFLECANRLGGAdkaTPKQILNLMDsESLTLDQVKSHLQKYR 268 9***************99***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 492 aa Download sequence
MSIQRFISTQ GNEFSSDCTL EFPKSSGQVQ DFVDQQLQYS SYMELCNFQL ASSSSSSIIS 60 CIGSPSSAFF ATERCLGLTQ YDNQDDTSQL TKNYDLQMSS YDPQQCRNGF FEDSMVQSEP 120 ISLPSFISPE GPCRQYTSSD ASEEERMLHL KNKLLGEFDA SYRRHPALPF DGNQDYCLSH 180 DLCGSQLTHT RQQSSSPSLT CHNSASSGAT QKPSKTRIRW TEDLHDRFLE CANRLGGADK 240 ATPKQILNLM DSESLTLDQV KSHLQKYRNA KHPESAGKSE KRNSLDTVTD IESKTYATCY 300 SLRFNLLILL FMLVHSKKNA SLFNSSIILA GNQIDSEFKL VCSATEITEA LKMQLEVQRG 360 RAKGKKQSVH EDLGSAEEDK IPVRRRGRPQ KPLKDDVEEE EQEVVKIEDE EEDSENTKGS 420 VLSKDVKNQV AVNGKKRKRT SQVKEADSMK VEDGVGTKAN SNDLIKSVGF RQNGSRRKNK 480 PRRAAEVGVE CR

Sequence ? help Back to Top

Protein Sequence Length: 492 aa Download sequence

MSIQRFISTQ GNEFSSDCTL EFPKSSGQVQ DFVDQQLQYS SYMELCNFQL ASSSSSSIIS  60
CIGSPSSAFF ATERCLGLTQ YDNQDDTSQL TKNYDLQMSS YDPQQCRNGF FEDSMVQSEP  120
ISLPSFISPE GPCRQYTSSD ASEEERMLHL KNKLLGEFDA SYRRHPALPF DGNQDYCLSH  180
DLCGSQLTHT RQQSSSPSLT CHNSASSGAT QKPSKTRIRW TEDLHDRFLE CANRLGGADK  240
ATPKQILNLM DSESLTLDQV KSHLQKYRNA KHPESAGKSE KRNSLDTVTD IESKTYATCY  300
SLRFNLLILL FMLVHSKKNA SLFNSSIILA GNQIDSEFKL VCSATEITEA LKMQLEVQRG  360
RAKGKKQSVH EDLGSAEEDK IPVRRRGRPQ KPLKDDVEEE EQEVVKIEDE EEDSENTKGS  420
VLSKDVKNQV AVNGKKRKRT SQVKEADSMK VEDGVGTKAN SNDLIKSVGF RQNGSRRKNK  480
PRRAAEVGVE CR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	435	440	KKRKRT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G06800.2	5e-28	G2-like family protein