PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT36511.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

C2H2

Protein Properties

Length: 357aa MW: 38510.6 Da PI: 6.1872

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT36511.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	13.2	0.00027	257	280	1	23
EEETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirt.H 23 + C+ C+++F + L++H + H PHT36511.1 257 FACKTCNRTFGSENALESHSKAkH 280 78*****************88767 PP

Sequence ? help Back to Top
Protein Sequence Length: 357 aa Download sequence
MTSFLRGVPK LKMPLILDRR EYCYLAQYCF VIASGTMHFS SGSLFFIPGM AESAEVKSGQ 60 PLSVQPGDDM ILHLSQASLG EVKKDKGSEP VCLFVTVDGK KLVLGTLKSD EEIPLTIANN 120 GKPEAKASAK DSAPAKQKVT VVEPSKGAKV DDSDESSDDD LSDDEDDSEM GEDDSDEDQS 180 DESEEETPEK AETSKKRPAD SAAKAPVLDK KKTKFTTPQK IDGKKGAVHV STPHPSKQAG 240 KTPGNKPNQT PKSGGSFACK TCNRTFGSEN ALESHSKAKH SAGKWSWVLR WSYIQFTLSW 300 KLLSLCLVVE DAGTNPLSLL FEVFLFSLTT VGKSGILACL VSPSPHLPKS RPLSSLL

Sequence ? help Back to Top

Protein Sequence Length: 357 aa Download sequence

MTSFLRGVPK LKMPLILDRR EYCYLAQYCF VIASGTMHFS SGSLFFIPGM AESAEVKSGQ  60
PLSVQPGDDM ILHLSQASLG EVKKDKGSEP VCLFVTVDGK KLVLGTLKSD EEIPLTIANN  120
GKPEAKASAK DSAPAKQKVT VVEPSKGAKV DDSDESSDDD LSDDEDDSEM GEDDSDEDQS  180
DESEEETPEK AETSKKRPAD SAAKAPVLDK KKTKFTTPQK IDGKKGAVHV STPHPSKQAG  240
KTPGNKPNQT PKSGGSFACK TCNRTFGSEN ALESHSKAKH SAGKWSWVLR WSYIQFTLSW  300
KLLSLCLVVE DAGTNPLSLL FEVFLFSLTT VGKSGILACL VSPSPHLPKS RPLSSLL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G03740.1	5e-24	C2H2 family protein