PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT36440.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family S1Fa-like
Protein Properties Length: 354aa    MW: 39082.2 Da    PI: 4.2664
Description S1Fa-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT36440.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1S1FA129.21.2e-40288354470
        S1FA   4 akveakGlnPGlivllvvgglllvflvgnyilyvyaqknlPPrkkkPvskkklkreklkqGvavPGe 70 
                 + ve+ G+nPGlivllv+ggl+l+fl+gny+lyvyaqk+lPP+kkkP+skkk+k+e+lkqGv++PGe
  PHT36440.1 288 KDVEVNGFNPGLIVLLVIGGLVLTFLIGNYVLYVYAQKTLPPKKKKPISKKKMKKERLKQGVSAPGE 354
                 679***************************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 354 aa     Download sequence    
MDNNDTNVIL AYLDTMSRDL AMVNERLDRM VSQREQVGCL DTRQEEGHSS CELRGTRALV  60
DPLDDEIDSP RENDLCPSSA NTYNLTKVPL PSDESIHKLV DSCENQGGST LVYELPITSE  120
VVDNDQSGGN DLDVLDCLGN PNCDCLGKDG FAYDPFAAHD SLCLCRDYSL EREGVTCLEI  180
LSTSSLCVSY VKPNSVVGLE TSEYTHKETI VGVDSCDTFI YLFYARDIFH RDIEGMPNFE  240
DDTLGESESG QGLSPWLLHP FDPGIPLPLL MLVSANCSHL LVEENMAKDV EVNGFNPGLI  300
VLLVIGGLVL TFLIGNYVLY VYAQKTLPPK KKKPISKKKM KKERLKQGVS APGE