PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT36334.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family Dof
Protein Properties Length: 364aa    MW: 39389.6 Da    PI: 9.2122
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT36334.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof117.93.9e-3777135462
      zf-Dof   4 kalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 
                 + +kcprC+stntkfCy+nnyslsqPr+fCk+CrryWt+GGa+r vPvGgg+r+nk+ss
  PHT36334.1  77 AVQKCPRCESTNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGAIRSVPVGGGCRRNKRSS 135
                 6789****************************************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 364 aa     Download sequence    
MVFSSISAYL DPSNWQQQVG YGIPNTQLPS APPQPTPPHP LATTPPPRPH GVVGEDSIRP  60
GSMADRARLA NIPMSEAVQK CPRCESTNTK FCYFNNYSLS QPRHFCKTCR RYWTRGGAIR  120
SVPVGGGCRR NKRSSTNSTT TSATKSSNNN NTSKSPASSQ ATNSGSTSNN SCTFSSQSSA  180
ASLLGLMNPQ LHPLRFMSPL GQLTDQHFTQ NDNVTMNYSS FSSSSPAPVI VGSTIESTNF  240
QLGMSNNLEQ WRLHQQLASQ FPYNLYGGLD SSSASGSGLY HFHPTHYSSN EVGGGGGVIS  300
QIRSKVSNPM LTQLALMKME DNQDHLATMP RQFLGHENLP SNGSHANWNE LSVSFSSSST  360
SNVL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37590.16e-42Dof family protein