PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | PHT35785.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
|
||||||||
Family | SBP | ||||||||
Protein Properties | Length: 140aa MW: 16199 Da PI: 7.0879 | ||||||||
Description | SBP family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SBP | 134.8 | 2.7e-42 | 56 | 132 | 2 | 78 |
-SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 2 CqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 Cqve+C+ad+ +ak yhrrhkvCe+h+kap+v + gl qrfCqqCsrfh+l efD++krsCrrrLa+hnerrrk+++ PHT35785.1 56 CQVEDCTADMVDAKAYHRRHKVCEFHAKAPAVPIGGLLQRFCQQCSRFHQLAEFDDTKRSCRRRLAGHNERRRKSAH 132 **************************************************************************976 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 140 aa Download sequence |
MENSKWEGKR NMMEADMEEE DDEEDEDFVE DTKRKRVLTR SGRKVSMGEG PRQPSCQVED 60 CTADMVDAKA YHRRHKVCEF HAKAPAVPIG GLLQRFCQQC SRFHQLAEFD DTKRSCRRRL 120 AGHNERRRKS AHESPGEGSS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT2G33810.1 | 7e-42 | SBP family protein |