PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT35742.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

TCP

Protein Properties

Length: 960aa MW: 110297 Da PI: 8.3752

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT35742.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	66.9	6.9e-21	102	241	1	130
TCP 1 aagkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt.......ssssaseceaesssssasnsssg.... 88 a+g+kdrhsk++T+ g++dRRvRls ++a++f+d+qd+LG+d++sk+i+WL+q++++ai +l +t + +s++++ ++++++s++ + PHT35742.1 102 ATGRKDRHSKVSTASGPKDRRVRLSPNTAIQFYDVQDRLGYDRPSKAIDWLIQESQRAINALEKTpfqvlsrKIDSSNKALNWRNVKSEDG---Qfale 197 589**************************************************************99888886666666644444444442...02234 PP TCP 89 ...kaaksaakskksqksaasalnlakesrakararare.rtrekm 130 +a k+++ ++ +++s++ ln+a + +a++ + + ++++k PHT35742.1 198 qswSADKKTELEELARHSSK--LNYAMQYSADQFPKGSYkEQSSKI 241 44455555556666666666..777777777776665554555554 PP

Sequence ? help Back to Top
Protein Sequence Length: 960 aa Download sequence
MNHQLQVSNE KEHKSSSQEE EKKDESFQEN AQEILQSDCQ NQHLQQLPNY FTSPSATLVQ 60 KHQSNTQCPS HKEEVKKVLL KRKPKRAKQD VMEVHGSRIV RATGRKDRHS KVSTASGPKD 120 RRVRLSPNTA IQFYDVQDRL GYDRPSKAID WLIQESQRAI NALEKTPFQV LSRKIDSSNK 180 ALNWRNVKSE DGQFALEQSW SADKKTELEE LARHSSKLNY AMQYSADQFP KGSYKEQSSK 240 ICPADVKIQS LNDNQIGNLN LFSAEKDSKI QSFCELQTHS KGQFHSETKE QSANDAKLRS 300 FCEFQNHQQG HFHSETEKQS PNDAKIQSFC ELQTYQQGHF YSETEKQSPS DAKFQPFREL 360 QTYQQGHFHS ETKKQSPNDA KIQSFYEMQT YQQGHFHSET KEQSANDAKI RSFCEFRTHQ 420 QDHFHSETKS ESTNDAKIQS FGELKTYQQG HFHSETEKQS PGDAKMESFS GLQTYQQGHF 480 HSETKEQSVN DAKIQSFREL QTYQQGNFHS ETEKQSPNDA KIQSFSELQT YQQGHFHSET 540 EKQSPSEAKI QSFCELHTYQ QGHLHLETKK QPPIDPKIQS FCEMQTYPQG HFHSETKNQS 600 AILSNFFNFQ SSHQNKSISF SGDHHQGFLP QNFPTVLGQN QMFNYQREAL QSSSYINNIG 660 FANDGLLGLC TAPIIQQEEE QQQGAEDNEY GEEESLKRYD PNGNSSSAEE LVKTFSIDRY 720 SIKMVYDLLK RRFIYENKDK MDEAWINYCG MLVCFDWKEF SIVTKLKCYR LSPSQVIPTL 780 TQKKTSCTPK KGKGNSSDPD HLVSIVGPSF KNKNLIEALK DCKVKHDGVI NAINALTASV 840 KKMTSKMGVI PSKKISYIDT PLEIKVAKRR SKDTSKVSSI IKKIKIAILI SLSCIDVQCA 900 WAIGEQHKLK KVDVTATAKE HYIKVDNPLT TSKHEEKWSL SVWENKRITR LKASTSQMRL

Sequence ? help Back to Top

Protein Sequence Length: 960 aa Download sequence

MNHQLQVSNE KEHKSSSQEE EKKDESFQEN AQEILQSDCQ NQHLQQLPNY FTSPSATLVQ  60
KHQSNTQCPS HKEEVKKVLL KRKPKRAKQD VMEVHGSRIV RATGRKDRHS KVSTASGPKD  120
RRVRLSPNTA IQFYDVQDRL GYDRPSKAID WLIQESQRAI NALEKTPFQV LSRKIDSSNK  180
ALNWRNVKSE DGQFALEQSW SADKKTELEE LARHSSKLNY AMQYSADQFP KGSYKEQSSK  240
ICPADVKIQS LNDNQIGNLN LFSAEKDSKI QSFCELQTHS KGQFHSETKE QSANDAKLRS  300
FCEFQNHQQG HFHSETEKQS PNDAKIQSFC ELQTYQQGHF YSETEKQSPS DAKFQPFREL  360
QTYQQGHFHS ETKKQSPNDA KIQSFYEMQT YQQGHFHSET KEQSANDAKI RSFCEFRTHQ  420
QDHFHSETKS ESTNDAKIQS FGELKTYQQG HFHSETEKQS PGDAKMESFS GLQTYQQGHF  480
HSETKEQSVN DAKIQSFREL QTYQQGNFHS ETEKQSPNDA KIQSFSELQT YQQGHFHSET  540
EKQSPSEAKI QSFCELHTYQ QGHLHLETKK QPPIDPKIQS FCEMQTYPQG HFHSETKNQS  600
AILSNFFNFQ SSHQNKSISF SGDHHQGFLP QNFPTVLGQN QMFNYQREAL QSSSYINNIG  660
FANDGLLGLC TAPIIQQEEE QQQGAEDNEY GEEESLKRYD PNGNSSSAEE LVKTFSIDRY  720
SIKMVYDLLK RRFIYENKDK MDEAWINYCG MLVCFDWKEF SIVTKLKCYR LSPSQVIPTL  780
TQKKTSCTPK KGKGNSSDPD HLVSIVGPSF KNKNLIEALK DCKVKHDGVI NAINALTASV  840
KKMTSKMGVI PSKKISYIDT PLEIKVAKRR SKDTSKVSSI IKKIKIAILI SLSCIDVQCA  900
WAIGEQHKLK KVDVTATAKE HYIKVDNPLT TSKHEEKWSL SVWENKRITR LKASTSQMRL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G31070.1	4e-32	TCP family protein